==2444857== Memcheck, a memory error detector ==2444857== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2444857== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2444857== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==2444857== Parent PID: 2437924 ==2444857== ==2444857== ==2444857== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2444857== Open file descriptor 12: ==2444857== at 0x109A626D: pipe (pipe.c:29) ==2444857== by 0x1976C07D: ??? ==2444857== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2444857== by 0x105F3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2444857== by 0x1058CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2444857== by 0xF283D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2444857== by 0xF0F52DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2444857== by 0xF0F532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2444857== by 0x131579: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2444857== by 0x12C94F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2444857== by 0x12EE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2444857== by 0x12ED37: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2444857== by 0x12F34B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2444857== by 0x12B145: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==2444857== ==2444857== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2444857== at 0x109AAC0C: __open_nocancel (open64_nocancel.c:39) ==2444857== by 0x1092EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2444857== by 0xF12A822: ??? ==2444857== by 0xF12A96F: ??? ==2444857== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2444857== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2444857== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2444857== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2444857== by 0x105F3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2444857== by 0x1058CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2444857== by 0xF283D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2444857== by 0xF0F52DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2444857== by 0xF0F532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2444857== by 0x131579: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2444857== by 0x12C94F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2444857== by 0x12EE3C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2444857== by 0x12ED37: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2444857== by 0x12F34B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2444857== by 0x12B145: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==2444857== ==2444857== Open file descriptor 115: ==2444857== ==2444857== ==2444857== Open file descriptor 112: ==2444857== ==2444857== ==2444857== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==2444857== ==2444857== ==2444857== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2444857== ==2444857== ==2444857== ==2444857== HEAP SUMMARY: ==2444857== in use at exit: 858,024 bytes in 12,113 blocks ==2444857== total heap usage: 500,643 allocs, 488,530 frees, 1,854,170,953 bytes allocated ==2444857== ==2444857== LEAK SUMMARY: ==2444857== definitely lost: 0 bytes in 0 blocks ==2444857== indirectly lost: 0 bytes in 0 blocks ==2444857== possibly lost: 0 bytes in 0 blocks ==2444857== still reachable: 56 bytes in 3 blocks ==2444857== suppressed: 857,968 bytes in 12,110 blocks ==2444857== Reachable blocks (those to which a pointer was found) are not shown. ==2444857== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2444857== ==2444857== For lists of detected and suppressed errors, rerun with: -s ==2444857== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)