==3305908== Memcheck, a memory error detector ==3305908== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3305908== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3305908== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation1d -malloc_debug -malloc_dump -memory_info ==3305908== Parent PID: 3289988 ==3305908== ==3305908== ==3305908== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3305908== Open file descriptor 12: ==3305908== at 0x125BB07D: pipe (pipe.c:29) ==3305908== by 0x1B36D07D: ??? ==3305908== by 0x164F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3305908== by 0x11EC3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3305908== by 0x11E5CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3305908== by 0x10B53D38: PetscInitialize (pinit.c:924) ==3305908== by 0x109BA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3305908== by 0x109BA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3305908== by 0x2254A3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3305908== by 0x21CB9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3305908== by 0x22067C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3305908== by 0x220577: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3305908== by 0x220B8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3305908== by 0x21B395: main (TestCryptSimulation1d.cpp:18) ==3305908== ==3305908== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3305908== at 0x125BFA1C: __open_nocancel (open64_nocancel.c:39) ==3305908== by 0x12543BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3305908== by 0x109F5822: ??? ==3305908== by 0x109F596F: ??? ==3305908== by 0x165986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3305908== by 0x16598938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3305908== by 0x1654E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3305908== by 0x164F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3305908== by 0x11EC3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3305908== by 0x11E5CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3305908== by 0x10B53D38: PetscInitialize (pinit.c:924) ==3305908== by 0x109BA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3305908== by 0x109BA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3305908== by 0x2254A3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3305908== by 0x21CB9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3305908== by 0x22067C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3305908== by 0x220577: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3305908== by 0x220B8B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3305908== by 0x21B395: main (TestCryptSimulation1d.cpp:18) ==3305908== ==3305908== Open file descriptor 115: ==3305908== ==3305908== ==3305908== Open file descriptor 112: ==3305908== ==3305908== ==3305908== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation1d_valgrind.txt ==3305908== ==3305908== ==3305908== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3305908== ==3305908== ==3305908== ==3305908== HEAP SUMMARY: ==3305908== in use at exit: 835,580 bytes in 11,673 blocks ==3305908== total heap usage: 4,123,944 allocs, 4,112,271 frees, 2,178,914,819 bytes allocated ==3305908== ==3305908== LEAK SUMMARY: ==3305908== definitely lost: 0 bytes in 0 blocks ==3305908== indirectly lost: 0 bytes in 0 blocks ==3305908== possibly lost: 0 bytes in 0 blocks ==3305908== still reachable: 56 bytes in 3 blocks ==3305908== suppressed: 835,524 bytes in 11,670 blocks ==3305908== Reachable blocks (those to which a pointer was found) are not shown. ==3305908== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3305908== ==3305908== For lists of detected and suppressed errors, rerun with: -s ==3305908== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)