==3291079== Memcheck, a memory error detector ==3291079== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3291079== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3291079== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==3291079== Parent PID: 3289988 ==3291079== ==3291079== ==3291079== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3291079== Open file descriptor 12: ==3291079== at 0x735007D: pipe (pipe.c:29) ==3291079== by 0x104D507D: ??? ==3291079== by 0xC61B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3291079== by 0x8DC6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3291079== by 0x8D5FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3291079== by 0x769FD38: PetscInitialize (pinit.c:924) ==3291079== by 0x68F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3291079== by 0x68F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3291079== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3291079== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3291079== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3291079== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3291079== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3291079== by 0x11B235: main (TestHdf5Converters.cpp:18) ==3291079== ==3291079== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3291079== at 0x7354A1C: __open_nocancel (open64_nocancel.c:39) ==3291079== by 0x72D8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3291079== by 0x692F822: ??? ==3291079== by 0x692F96F: ??? ==3291079== by 0xC6C06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3291079== by 0xC6C0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3291079== by 0xC676922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3291079== by 0xC61B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3291079== by 0x8DC6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3291079== by 0x8D5FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3291079== by 0x769FD38: PetscInitialize (pinit.c:924) ==3291079== by 0x68F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3291079== by 0x68F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3291079== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3291079== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3291079== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3291079== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3291079== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3291079== by 0x11B235: main (TestHdf5Converters.cpp:18) ==3291079== ==3291079== Open file descriptor 115: ==3291079== ==3291079== ==3291079== Open file descriptor 112: ==3291079== ==3291079== ==3291079== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==3291079== ==3291079== ==3291079== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3291079== ==3291079== ==3291079== ==3291079== HEAP SUMMARY: ==3291079== in use at exit: 835,537 bytes in 11,676 blocks ==3291079== total heap usage: 214,997 allocs, 203,321 frees, 1,596,631,122 bytes allocated ==3291079== ==3291079== LEAK SUMMARY: ==3291079== definitely lost: 0 bytes in 0 blocks ==3291079== indirectly lost: 0 bytes in 0 blocks ==3291079== possibly lost: 0 bytes in 0 blocks ==3291079== still reachable: 24 bytes in 2 blocks ==3291079== suppressed: 835,513 bytes in 11,674 blocks ==3291079== Reachable blocks (those to which a pointer was found) are not shown. ==3291079== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3291079== ==3291079== For lists of detected and suppressed errors, rerun with: -s ==3291079== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)