==3290626== Memcheck, a memory error detector ==3290626== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3290626== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3290626== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestMutableVertexMesh -malloc_debug -malloc_dump -memory_info ==3290626== Parent PID: 3289988 ==3290626== ==3290626== ==3290626== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3290626== Open file descriptor 12: ==3290626== at 0x815607D: pipe (pipe.c:29) ==3290626== by 0x100C407D: ??? ==3290626== by 0xBA134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3290626== by 0x7A60418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3290626== by 0x79F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3290626== by 0x66F0D38: PetscInitialize (pinit.c:924) ==3290626== by 0x65552DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3290626== by 0x655532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3290626== by 0x1B5143: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3290626== by 0x1AE9BD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3290626== by 0x1B27F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3290626== by 0x1B2696: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3290626== by 0x1B2D2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3290626== by 0x1ACDE5: main (TestMutableVertexMesh.cpp:19) ==3290626== ==3290626== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3290626== at 0x815AA1C: __open_nocancel (open64_nocancel.c:39) ==3290626== by 0x80DEBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3290626== by 0x6590822: ??? ==3290626== by 0x659096F: ??? ==3290626== by 0xBAB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3290626== by 0xBAB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3290626== by 0xBA6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3290626== by 0xBA132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3290626== by 0x7A60418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3290626== by 0x79F9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3290626== by 0x66F0D38: PetscInitialize (pinit.c:924) ==3290626== by 0x65552DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3290626== by 0x655532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3290626== by 0x1B5143: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3290626== by 0x1AE9BD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3290626== by 0x1B27F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3290626== by 0x1B2696: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3290626== by 0x1B2D2D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3290626== by 0x1ACDE5: main (TestMutableVertexMesh.cpp:19) ==3290626== ==3290626== Open file descriptor 115: ==3290626== ==3290626== ==3290626== Open file descriptor 112: ==3290626== ==3290626== ==3290626== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMesh_valgrind.txt ==3290626== ==3290626== ==3290626== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3290626== ==3290626== ==3290626== ==3290626== HEAP SUMMARY: ==3290626== in use at exit: 838,057 bytes in 11,677 blocks ==3290626== total heap usage: 67,110 allocs, 55,433 frees, 1,541,403,150 bytes allocated ==3290626== ==3290626== LEAK SUMMARY: ==3290626== definitely lost: 0 bytes in 0 blocks ==3290626== indirectly lost: 0 bytes in 0 blocks ==3290626== possibly lost: 0 bytes in 0 blocks ==3290626== still reachable: 2,576 bytes in 3 blocks ==3290626== suppressed: 835,481 bytes in 11,674 blocks ==3290626== Reachable blocks (those to which a pointer was found) are not shown. ==3290626== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3290626== ==3290626== For lists of detected and suppressed errors, rerun with: -s ==3290626== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)