==3305757== Memcheck, a memory error detector ==3305757== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3305757== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3305757== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==3305757== Parent PID: 3289988 ==3305757== ==3305757== ==3305757== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3305757== Open file descriptor 12: ==3305757== at 0x10BA307D: pipe (pipe.c:29) ==3305757== by 0x1B36F07D: ??? ==3305757== by 0x1551D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3305757== by 0x104AB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3305757== by 0x10444D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3305757== by 0xF13BD38: PetscInitialize (pinit.c:924) ==3305757== by 0xEFA22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3305757== by 0xEFA232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3305757== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3305757== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3305757== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3305757== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3305757== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3305757== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==3305757== ==3305757== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3305757== at 0x10BA7A1C: __open_nocancel (open64_nocancel.c:39) ==3305757== by 0x10B2BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3305757== by 0xEFDD822: ??? ==3305757== by 0xEFDD96F: ??? ==3305757== by 0x155C26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3305757== by 0x155C2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3305757== by 0x15578922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3305757== by 0x1551D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3305757== by 0x104AB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3305757== by 0x10444D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3305757== by 0xF13BD38: PetscInitialize (pinit.c:924) ==3305757== by 0xEFA22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3305757== by 0xEFA232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3305757== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3305757== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3305757== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3305757== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3305757== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3305757== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==3305757== ==3305757== Open file descriptor 115: ==3305757== ==3305757== ==3305757== Open file descriptor 112: ==3305757== ==3305757== ==3305757== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==3305757== ==3305757== ==3305757== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3305757== ==3305757== ==3305757== ==3305757== HEAP SUMMARY: ==3305757== in use at exit: 835,713 bytes in 11,678 blocks ==3305757== total heap usage: 870,406 allocs, 858,728 frees, 1,662,657,759 bytes allocated ==3305757== ==3305757== LEAK SUMMARY: ==3305757== definitely lost: 0 bytes in 0 blocks ==3305757== indirectly lost: 0 bytes in 0 blocks ==3305757== possibly lost: 0 bytes in 0 blocks ==3305757== still reachable: 120 bytes in 4 blocks ==3305757== suppressed: 835,593 bytes in 11,674 blocks ==3305757== Reachable blocks (those to which a pointer was found) are not shown. ==3305757== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3305757== ==3305757== For lists of detected and suppressed errors, rerun with: -s ==3305757== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)