==2463862== Memcheck, a memory error detector ==2463862== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2463862== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2463862== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==2463862== Parent PID: 2462270 ==2463862== ==2463862== ==2463862== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2463862== Open file descriptor 12: ==2463862== at 0xD89526D: pipe (pipe.c:29) ==2463862== by 0x1976D07D: ??? ==2463862== by 0x14D0C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2463862== by 0x1114C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2463862== by 0x110E5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2463862== by 0xFDDAD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2463862== by 0xD4992DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2463862== by 0xD49932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2463862== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2463862== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2463862== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2463862== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2463862== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2463862== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==2463862== ==2463862== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2463862== at 0xD899C0C: __open_nocancel (open64_nocancel.c:39) ==2463862== by 0xD81DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2463862== by 0xD4CE822: ??? ==2463862== by 0xD4CE96F: ??? ==2463862== by 0x14DB16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2463862== by 0x14DB1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2463862== by 0x14D67922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2463862== by 0x14D0C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2463862== by 0x1114C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2463862== by 0x110E5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2463862== by 0xFDDAD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2463862== by 0xD4992DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2463862== by 0xD49932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2463862== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2463862== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2463862== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2463862== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2463862== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2463862== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==2463862== ==2463862== Open file descriptor 115: ==2463862== ==2463862== ==2463862== Open file descriptor 112: ==2463862== ==2463862== ==2463862== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==2463862== ==2463862== ==2463862== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2463862== ==2463862== ==2463862== ==2463862== HEAP SUMMARY: ==2463862== in use at exit: 858,024 bytes in 12,113 blocks ==2463862== total heap usage: 64,379 allocs, 52,266 frees, 1,543,651,339 bytes allocated ==2463862== ==2463862== LEAK SUMMARY: ==2463862== definitely lost: 0 bytes in 0 blocks ==2463862== indirectly lost: 0 bytes in 0 blocks ==2463862== possibly lost: 0 bytes in 0 blocks ==2463862== still reachable: 56 bytes in 3 blocks ==2463862== suppressed: 857,968 bytes in 12,110 blocks ==2463862== Reachable blocks (those to which a pointer was found) are not shown. ==2463862== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2463862== ==2463862== For lists of detected and suppressed errors, rerun with: -s ==2463862== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)