==2470986== Memcheck, a memory error detector ==2470986== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2470986== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2470986== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==2470986== Parent PID: 2462270 ==2470986== ==2470986== ==2470986== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2470986== Open file descriptor 12: ==2470986== at 0x10CD026D: pipe (pipe.c:29) ==2470986== by 0x1976C07D: ??? ==2470986== by 0x14D0D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2470986== by 0x10836418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2470986== by 0x107CFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2470986== by 0xF4C6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2470986== by 0xF3382DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2470986== by 0xF33832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2470986== by 0x260FE5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2470986== by 0x25974B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2470986== by 0x25E26A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2470986== by 0x25E10B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2470986== by 0x25E7A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2470986== by 0x255DB5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2470986== ==2470986== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2470986== at 0x10CD4C0C: __open_nocancel (open64_nocancel.c:39) ==2470986== by 0x10C58BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2470986== by 0xF36D822: ??? ==2470986== by 0xF36D96F: ??? ==2470986== by 0x14DB26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2470986== by 0x14DB2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2470986== by 0x14D68922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2470986== by 0x14D0D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2470986== by 0x10836418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2470986== by 0x107CFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2470986== by 0xF4C6D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2470986== by 0xF3382DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2470986== by 0xF33832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2470986== by 0x260FE5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2470986== by 0x25974B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2470986== by 0x25E26A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2470986== by 0x25E10B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2470986== by 0x25E7A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2470986== by 0x255DB5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2470986== ==2470986== Open file descriptor 115: ==2470986== ==2470986== ==2470986== Open file descriptor 112: ==2470986== ==2470986== ==2470986== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==2470986== ==2470986== ==2470986== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2470986== ==2470986== ==2470986== ==2470986== HEAP SUMMARY: ==2470986== in use at exit: 857,961 bytes in 12,109 blocks ==2470986== total heap usage: 3,792,376 allocs, 3,780,267 frees, 1,712,078,803 bytes allocated ==2470986== ==2470986== LEAK SUMMARY: ==2470986== definitely lost: 0 bytes in 0 blocks ==2470986== indirectly lost: 0 bytes in 0 blocks ==2470986== possibly lost: 0 bytes in 0 blocks ==2470986== still reachable: 56 bytes in 3 blocks ==2470986== suppressed: 857,905 bytes in 12,106 blocks ==2470986== Reachable blocks (those to which a pointer was found) are not shown. ==2470986== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2470986== ==2470986== For lists of detected and suppressed errors, rerun with: -s ==2470986== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)