==3351183== Memcheck, a memory error detector ==3351183== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3351183== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3351183== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellwiseDataGradient -malloc_debug -malloc_dump -memory_info ==3351183== Parent PID: 3349457 ==3351183== ==3351183== ==3351183== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3351183== Open file descriptor 12: ==3351183== at 0xF80207D: pipe (pipe.c:29) ==3351183== by 0x196AB07D: ??? ==3351183== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3351183== by 0x114A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3351183== by 0x1143CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3351183== by 0x10133D38: PetscInitialize (pinit.c:924) ==3351183== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3351183== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3351183== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3351183== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3351183== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3351183== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3351183== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3351183== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==3351183== ==3351183== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3351183== at 0xF806A1C: __open_nocancel (open64_nocancel.c:39) ==3351183== by 0xF78ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3351183== by 0xF135822: ??? ==3351183== by 0xF13596F: ??? ==3351183== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3351183== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3351183== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3351183== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3351183== by 0x114A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3351183== by 0x1143CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3351183== by 0x10133D38: PetscInitialize (pinit.c:924) ==3351183== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3351183== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3351183== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3351183== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3351183== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3351183== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3351183== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3351183== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==3351183== ==3351183== Open file descriptor 115: ==3351183== ==3351183== ==3351183== Open file descriptor 112: ==3351183== ==3351183== ==3351183== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellwiseDataGradient_valgrind.txt ==3351183== ==3351183== ==3351183== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3351183== ==3351183== ==3351183== ==3351183== HEAP SUMMARY: ==3351183== in use at exit: 835,633 bytes in 11,677 blocks ==3351183== total heap usage: 427,249 allocs, 415,572 frees, 1,555,401,767 bytes allocated ==3351183== ==3351183== LEAK SUMMARY: ==3351183== definitely lost: 0 bytes in 0 blocks ==3351183== indirectly lost: 0 bytes in 0 blocks ==3351183== possibly lost: 0 bytes in 0 blocks ==3351183== still reachable: 56 bytes in 3 blocks ==3351183== suppressed: 835,577 bytes in 11,674 blocks ==3351183== Reachable blocks (those to which a pointer was found) are not shown. ==3351183== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3351183== ==3351183== For lists of detected and suppressed errors, rerun with: -s ==3351183== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)