==3351376== Memcheck, a memory error detector ==3351376== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3351376== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3351376== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestDeltaNotchModifier -malloc_debug -malloc_dump -memory_info ==3351376== Parent PID: 3349457 ==3351376== ==3351376== ==3351376== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3351376== Open file descriptor 12: ==3351376== at 0xF84407D: pipe (pipe.c:29) ==3351376== by 0x196AB07D: ??? ==3351376== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3351376== by 0x114A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3351376== by 0x1143CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3351376== by 0x10131D38: PetscInitialize (pinit.c:924) ==3351376== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3351376== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3351376== by 0x208508: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3351376== by 0x1FFF99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3351376== by 0x203992: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3351376== by 0x203832: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3351376== by 0x203EC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3351376== by 0x1FE3B5: main (TestDeltaNotchModifier.cpp:19) ==3351376== ==3351376== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3351376== at 0xF848A1C: __open_nocancel (open64_nocancel.c:39) ==3351376== by 0xF7CCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3351376== by 0xF135822: ??? ==3351376== by 0xF13596F: ??? ==3351376== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3351376== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3351376== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3351376== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3351376== by 0x114A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3351376== by 0x1143CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3351376== by 0x10131D38: PetscInitialize (pinit.c:924) ==3351376== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3351376== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3351376== by 0x208508: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3351376== by 0x1FFF99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3351376== by 0x203992: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3351376== by 0x203832: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3351376== by 0x203EC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3351376== by 0x1FE3B5: main (TestDeltaNotchModifier.cpp:19) ==3351376== ==3351376== Open file descriptor 115: ==3351376== ==3351376== ==3351376== Open file descriptor 112: ==3351376== ==3351376== ==3351376== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDeltaNotchModifier_valgrind.txt ==3351376== ==3351376== ==3351376== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3351376== ==3351376== ==3351376== ==3351376== HEAP SUMMARY: ==3351376== in use at exit: 835,564 bytes in 11,673 blocks ==3351376== total heap usage: 5,566,585 allocs, 5,554,912 frees, 9,089,541,359 bytes allocated ==3351376== ==3351376== LEAK SUMMARY: ==3351376== definitely lost: 0 bytes in 0 blocks ==3351376== indirectly lost: 0 bytes in 0 blocks ==3351376== possibly lost: 0 bytes in 0 blocks ==3351376== still reachable: 56 bytes in 3 blocks ==3351376== suppressed: 835,508 bytes in 11,670 blocks ==3351376== Reachable blocks (those to which a pointer was found) are not shown. ==3351376== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3351376== ==3351376== For lists of detected and suppressed errors, rerun with: -s ==3351376== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)