==3350772== Memcheck, a memory error detector ==3350772== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3350772== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3350772== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedSrnModels -malloc_debug -malloc_dump -memory_info ==3350772== Parent PID: 3349457 ==3350772== ==3350772== ==3350772== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3350772== Open file descriptor 12: ==3350772== at 0xED5907D: pipe (pipe.c:29) ==3350772== by 0x196AC07D: ??? ==3350772== by 0x13C0A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3350772== by 0xE9A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3350772== by 0xE941D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3350772== by 0xD638D38: PetscInitialize (pinit.c:924) ==3350772== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3350772== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3350772== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3350772== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3350772== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3350772== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3350772== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3350772== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==3350772== ==3350772== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3350772== at 0xED5DA1C: __open_nocancel (open64_nocancel.c:39) ==3350772== by 0xECE1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3350772== by 0xD4D8822: ??? ==3350772== by 0xD4D896F: ??? ==3350772== by 0x13CAF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3350772== by 0x13CAF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3350772== by 0x13C65922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3350772== by 0x13C0A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3350772== by 0xE9A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3350772== by 0xE941D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3350772== by 0xD638D38: PetscInitialize (pinit.c:924) ==3350772== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3350772== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3350772== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3350772== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3350772== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3350772== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3350772== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3350772== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==3350772== ==3350772== Open file descriptor 115: ==3350772== ==3350772== ==3350772== Open file descriptor 112: ==3350772== ==3350772== ==3350772== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedSrnModels_valgrind.txt ==3350772== ==3350772== ==3350772== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3350772== ==3350772== ==3350772== ==3350772== HEAP SUMMARY: ==3350772== in use at exit: 835,649 bytes in 11,678 blocks ==3350772== total heap usage: 65,626 allocs, 53,948 frees, 1,541,216,022 bytes allocated ==3350772== ==3350772== LEAK SUMMARY: ==3350772== definitely lost: 0 bytes in 0 blocks ==3350772== indirectly lost: 0 bytes in 0 blocks ==3350772== possibly lost: 0 bytes in 0 blocks ==3350772== still reachable: 72 bytes in 4 blocks ==3350772== suppressed: 835,577 bytes in 11,674 blocks ==3350772== Reachable blocks (those to which a pointer was found) are not shown. ==3350772== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3350772== ==3350772== For lists of detected and suppressed errors, rerun with: -s ==3350772== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)