==3387505== Memcheck, a memory error detector ==3387505== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3387505== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3387505== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==3387505== Parent PID: 3385653 ==3387505== ==3387505== ==3387505== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3387505== Open file descriptor 12: ==3387505== at 0xF0A007D: pipe (pipe.c:29) ==3387505== by 0x196AC07D: ??? ==3387505== by 0x13C0A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3387505== by 0xE9A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3387505== by 0xE941D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3387505== by 0xD638D38: PetscInitialize (pinit.c:924) ==3387505== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3387505== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3387505== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3387505== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3387505== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3387505== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3387505== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3387505== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==3387505== ==3387505== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3387505== at 0xF0A4A1C: __open_nocancel (open64_nocancel.c:39) ==3387505== by 0xF028BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3387505== by 0xD4D8822: ??? ==3387505== by 0xD4D896F: ??? ==3387505== by 0x13CAF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3387505== by 0x13CAF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3387505== by 0x13C65922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3387505== by 0x13C0A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3387505== by 0xE9A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3387505== by 0xE941D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3387505== by 0xD638D38: PetscInitialize (pinit.c:924) ==3387505== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3387505== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3387505== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3387505== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3387505== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3387505== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3387505== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3387505== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==3387505== ==3387505== Open file descriptor 115: ==3387505== ==3387505== ==3387505== Open file descriptor 112: ==3387505== ==3387505== ==3387505== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==3387505== ==3387505== ==3387505== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3387505== ==3387505== ==3387505== ==3387505== HEAP SUMMARY: ==3387505== in use at exit: 835,633 bytes in 11,677 blocks ==3387505== total heap usage: 75,916 allocs, 64,239 frees, 1,541,722,620 bytes allocated ==3387505== ==3387505== LEAK SUMMARY: ==3387505== definitely lost: 0 bytes in 0 blocks ==3387505== indirectly lost: 0 bytes in 0 blocks ==3387505== possibly lost: 0 bytes in 0 blocks ==3387505== still reachable: 56 bytes in 3 blocks ==3387505== suppressed: 835,577 bytes in 11,674 blocks ==3387505== Reachable blocks (those to which a pointer was found) are not shown. ==3387505== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3387505== ==3387505== For lists of detected and suppressed errors, rerun with: -s ==3387505== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)