==3401451== Memcheck, a memory error detector ==3401451== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3401451== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3401451== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSimpleCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==3401451== Parent PID: 3385653 ==3401451== ==3401451== ==3401451== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3401451== Open file descriptor 12: ==3401451== at 0x1096007D: pipe (pipe.c:29) ==3401451== by 0x1B36D07D: ??? ==3401451== by 0x154CA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3401451== by 0x10268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3401451== by 0x10201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3401451== by 0xEEF8D38: PetscInitialize (pinit.c:924) ==3401451== by 0xED5F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3401451== by 0xED5F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3401451== by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3401451== by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3401451== by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3401451== by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3401451== by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3401451== by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==3401451== ==3401451== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3401451== at 0x10964A1C: __open_nocancel (open64_nocancel.c:39) ==3401451== by 0x108E8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3401451== by 0xED9A822: ??? ==3401451== by 0xED9A96F: ??? ==3401451== by 0x1556F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3401451== by 0x1556F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3401451== by 0x15525922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3401451== by 0x154CA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3401451== by 0x10268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3401451== by 0x10201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3401451== by 0xEEF8D38: PetscInitialize (pinit.c:924) ==3401451== by 0xED5F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3401451== by 0xED5F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3401451== by 0x186CD7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3401451== by 0x17F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3401451== by 0x18258E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3401451== by 0x18242E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3401451== by 0x182AC5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3401451== by 0x17BBF5: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==3401451== ==3401451== Open file descriptor 115: ==3401451== ==3401451== ==3401451== Open file descriptor 112: ==3401451== ==3401451== ==3401451== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModelsForCrypt_valgrind.txt ==3401451== ==3401451== ==3401451== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3401451== ==3401451== ==3401451== ==3401451== HEAP SUMMARY: ==3401451== in use at exit: 835,713 bytes in 11,678 blocks ==3401451== total heap usage: 762,173 allocs, 750,495 frees, 1,574,353,217 bytes allocated ==3401451== ==3401451== LEAK SUMMARY: ==3401451== definitely lost: 0 bytes in 0 blocks ==3401451== indirectly lost: 0 bytes in 0 blocks ==3401451== possibly lost: 0 bytes in 0 blocks ==3401451== still reachable: 120 bytes in 4 blocks ==3401451== suppressed: 835,593 bytes in 11,674 blocks ==3401451== Reachable blocks (those to which a pointer was found) are not shown. ==3401451== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3401451== ==3401451== For lists of detected and suppressed errors, rerun with: -s ==3401451== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)