==3401596== Memcheck, a memory error detector ==3401596== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3401596== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3401596== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexBasedCellPopulationForCrypt -malloc_debug -malloc_dump -memory_info ==3401596== Parent PID: 3385653 ==3401596== ==3401596== ==3401596== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3401596== Open file descriptor 12: ==3401596== at 0x1257907D: pipe (pipe.c:29) ==3401596== by 0x1B36D07D: ??? ==3401596== by 0x164F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3401596== by 0x11E81418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3401596== by 0x11E1AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3401596== by 0x10AE3D38: PetscInitialize (pinit.c:924) ==3401596== by 0x109BA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3401596== by 0x109BA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3401596== by 0x11D953: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3401596== by 0x119133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3401596== by 0x11B52C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3401596== by 0x11B427: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3401596== by 0x11BA3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3401596== by 0x117935: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==3401596== ==3401596== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3401596== at 0x1257DA1C: __open_nocancel (open64_nocancel.c:39) ==3401596== by 0x12501BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3401596== by 0x11D73822: ??? ==3401596== by 0x11D7396F: ??? ==3401596== by 0x165986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3401596== by 0x16598938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3401596== by 0x1654E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3401596== by 0x164F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3401596== by 0x11E81418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3401596== by 0x11E1AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3401596== by 0x10AE3D38: PetscInitialize (pinit.c:924) ==3401596== by 0x109BA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3401596== by 0x109BA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3401596== by 0x11D953: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3401596== by 0x119133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3401596== by 0x11B52C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3401596== by 0x11B427: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3401596== by 0x11BA3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3401596== by 0x117935: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==3401596== ==3401596== Open file descriptor 115: ==3401596== ==3401596== ==3401596== Open file descriptor 112: ==3401596== ==3401596== ==3401596== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulationForCrypt_valgrind.txt ==3401596== ==3401596== ==3401596== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3401596== ==3401596== ==3401596== ==3401596== HEAP SUMMARY: ==3401596== in use at exit: 835,729 bytes in 11,678 blocks ==3401596== total heap usage: 62,296 allocs, 50,618 frees, 1,540,706,736 bytes allocated ==3401596== ==3401596== LEAK SUMMARY: ==3401596== definitely lost: 0 bytes in 0 blocks ==3401596== indirectly lost: 0 bytes in 0 blocks ==3401596== possibly lost: 0 bytes in 0 blocks ==3401596== still reachable: 136 bytes in 4 blocks ==3401596== suppressed: 835,593 bytes in 11,674 blocks ==3401596== Reachable blocks (those to which a pointer was found) are not shown. ==3401596== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3401596== ==3401596== For lists of detected and suppressed errors, rerun with: -s ==3401596== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 38 from 38)