==1775735== Memcheck, a memory error detector ==1775735== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1775735== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1775735== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestAlarcon2004OxygenBasedCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==1775735== Parent PID: 1774174 ==1775735== ==1775735== ==1775735== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1775735== Open file descriptor 12: ==1775735== at 0xEF9607D: pipe (pipe.c:29) ==1775735== by 0x196AD07D: ??? ==1775735== by 0x13C534CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1775735== by 0xEBE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1775735== by 0xEB7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1775735== by 0xD873D38: PetscInitialize (pinit.c:924) ==1775735== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1775735== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1775735== by 0x123229: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1775735== by 0x11E723: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1775735== by 0x120D04: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1775735== by 0x120C00: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1775735== by 0x121213: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1775735== by 0x11CF25: main (TestAlarcon2004OxygenBasedCellCycleOdeSystem.cpp:18) ==1775735== ==1775735== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1775735== at 0xEF9AA1C: __open_nocancel (open64_nocancel.c:39) ==1775735== by 0xEF1EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1775735== by 0xD717822: ??? ==1775735== by 0xD71796F: ??? ==1775735== by 0x13CF86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1775735== by 0x13CF8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1775735== by 0x13CAE922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1775735== by 0x13C532DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1775735== by 0xEBE3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1775735== by 0xEB7CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1775735== by 0xD873D38: PetscInitialize (pinit.c:924) ==1775735== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1775735== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1775735== by 0x123229: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1775735== by 0x11E723: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1775735== by 0x120D04: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1775735== by 0x120C00: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1775735== by 0x121213: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1775735== by 0x11CF25: main (TestAlarcon2004OxygenBasedCellCycleOdeSystem.cpp:18) ==1775735== ==1775735== Open file descriptor 115: ==1775735== ==1775735== ==1775735== Open file descriptor 112: ==1775735== ==1775735== ==1775735== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAlarcon2004OxygenBasedCellCycleOdeSystem_valgrind.txt ==1775735== ==1775735== ==1775735== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1775735== ==1775735== ==1775735== ==1775735== HEAP SUMMARY: ==1775735== in use at exit: 995,553 bytes in 13,913 blocks ==1775735== total heap usage: 178,772 allocs, 164,859 frees, 1,582,718,740 bytes allocated ==1775735== ==1775735== LEAK SUMMARY: ==1775735== definitely lost: 0 bytes in 0 blocks ==1775735== indirectly lost: 0 bytes in 0 blocks ==1775735== possibly lost: 0 bytes in 0 blocks ==1775735== still reachable: 24 bytes in 2 blocks ==1775735== suppressed: 995,529 bytes in 13,911 blocks ==1775735== Reachable blocks (those to which a pointer was found) are not shown. ==1775735== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1775735== ==1775735== For lists of detected and suppressed errors, rerun with: -s ==1775735== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)