==1776559== Memcheck, a memory error detector ==1776559== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1776559== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1776559== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==1776559== Parent PID: 1774174 ==1776559== ==1776559== ==1776559== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1776559== Open file descriptor 12: ==1776559== at 0x10DDA07D: pipe (pipe.c:29) ==1776559== by 0x196AE07D: ??? ==1776559== by 0x14C154CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1776559== by 0x105FB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1776559== by 0x10594D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1776559== by 0xF28BD38: PetscInitialize (pinit.c:924) ==1776559== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1776559== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1776559== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1776559== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1776559== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1776559== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1776559== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1776559== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==1776559== ==1776559== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1776559== at 0x10DDEA1C: __open_nocancel (open64_nocancel.c:39) ==1776559== by 0x10D62BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1776559== by 0xF12F822: ??? ==1776559== by 0xF12F96F: ??? ==1776559== by 0x14CBC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1776559== by 0x14CBC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1776559== by 0x14C72922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1776559== by 0x14C152DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1776559== by 0x105FB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1776559== by 0x10594D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1776559== by 0xF28BD38: PetscInitialize (pinit.c:924) ==1776559== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1776559== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1776559== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1776559== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1776559== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1776559== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1776559== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1776559== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==1776559== ==1776559== Open file descriptor 115: ==1776559== ==1776559== ==1776559== Open file descriptor 112: ==1776559== ==1776559== ==1776559== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==1776559== ==1776559== ==1776559== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1776559== ==1776559== ==1776559== ==1776559== HEAP SUMMARY: ==1776559== in use at exit: 995,585 bytes in 13,914 blocks ==1776559== total heap usage: 867,490 allocs, 853,576 frees, 1,737,147,274 bytes allocated ==1776559== ==1776559== LEAK SUMMARY: ==1776559== definitely lost: 0 bytes in 0 blocks ==1776559== indirectly lost: 0 bytes in 0 blocks ==1776559== possibly lost: 0 bytes in 0 blocks ==1776559== still reachable: 56 bytes in 3 blocks ==1776559== suppressed: 995,529 bytes in 13,911 blocks ==1776559== Reachable blocks (those to which a pointer was found) are not shown. ==1776559== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1776559== ==1776559== For lists of detected and suppressed errors, rerun with: -s ==1776559== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)