==1776332== Memcheck, a memory error detector ==1776332== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1776332== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1776332== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==1776332== Parent PID: 1774174 ==1776332== ==1776332== ==1776332== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1776332== Open file descriptor 12: ==1776332== at 0xF8E107D: pipe (pipe.c:29) ==1776332== by 0x196AE07D: ??? ==1776332== by 0x14CB54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1776332== by 0x11582418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1776332== by 0x1151BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1776332== by 0x10212D38: PetscInitialize (pinit.c:924) ==1776332== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1776332== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1776332== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1776332== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1776332== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1776332== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1776332== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1776332== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==1776332== ==1776332== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1776332== at 0xF8E5A1C: __open_nocancel (open64_nocancel.c:39) ==1776332== by 0xF869BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1776332== by 0xF12F822: ??? ==1776332== by 0xF12F96F: ??? ==1776332== by 0x14D5A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1776332== by 0x14D5A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1776332== by 0x14D10922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1776332== by 0x14CB52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1776332== by 0x11582418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1776332== by 0x1151BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1776332== by 0x10212D38: PetscInitialize (pinit.c:924) ==1776332== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1776332== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1776332== by 0x12B4BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1776332== by 0x1266B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1776332== by 0x128CBE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1776332== by 0x128BBA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1776332== by 0x1291CD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1776332== by 0x124EB5: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==1776332== ==1776332== Open file descriptor 115: ==1776332== ==1776332== ==1776332== Open file descriptor 112: ==1776332== ==1776332== ==1776332== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==1776332== ==1776332== ==1776332== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1776332== ==1776332== ==1776332== ==1776332== HEAP SUMMARY: ==1776332== in use at exit: 995,585 bytes in 13,914 blocks ==1776332== total heap usage: 65,731 allocs, 51,817 frees, 1,571,979,972 bytes allocated ==1776332== ==1776332== LEAK SUMMARY: ==1776332== definitely lost: 0 bytes in 0 blocks ==1776332== indirectly lost: 0 bytes in 0 blocks ==1776332== possibly lost: 0 bytes in 0 blocks ==1776332== still reachable: 56 bytes in 3 blocks ==1776332== suppressed: 995,529 bytes in 13,911 blocks ==1776332== Reachable blocks (those to which a pointer was found) are not shown. ==1776332== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1776332== ==1776332== For lists of detected and suppressed errors, rerun with: -s ==1776332== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)