==2546778== Memcheck, a memory error detector ==2546778== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2546778== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2546778== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedVsBidomainProblem -malloc_debug -malloc_dump -memory_info ==2546778== Parent PID: 2537244 ==2546778== ==2546778== ==2546778== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2546778== Open file descriptor 12: ==2546778== at 0xA8AA26D: pipe (pipe.c:29) ==2546778== by 0x143EC07D: ??? ==2546778== by 0xFB8C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2546778== by 0xBFA4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2546778== by 0xBF3DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2546778== by 0xAC34D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2546778== by 0xA4D62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2546778== by 0xA4D632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2546778== by 0x12E1B0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2546778== by 0x128E6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2546778== by 0x12C132: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2546778== by 0x12BFD2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2546778== by 0x12C669: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2546778== by 0x127295: main (TestExtendedVsBidomainProblem.cpp:19) ==2546778== ==2546778== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2546778== at 0xA8AEC0C: __open_nocancel (open64_nocancel.c:39) ==2546778== by 0xA832BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2546778== by 0xA50B822: ??? ==2546778== by 0xA50B96F: ??? ==2546778== by 0xFC316DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2546778== by 0xFC31938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2546778== by 0xFBE7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2546778== by 0xFB8C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2546778== by 0xBFA4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2546778== by 0xBF3DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2546778== by 0xAC34D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2546778== by 0xA4D62DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2546778== by 0xA4D632D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2546778== by 0x12E1B0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2546778== by 0x128E6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2546778== by 0x12C132: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2546778== by 0x12BFD2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2546778== by 0x12C669: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2546778== by 0x127295: main (TestExtendedVsBidomainProblem.cpp:19) ==2546778== ==2546778== Open file descriptor 115: ==2546778== ==2546778== ==2546778== Open file descriptor 112: ==2546778== ==2546778== ==2546778== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedVsBidomainProblem_valgrind.txt ==2546778== ==2546778== ==2546778== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2546778== ==2546778== ==2546778== ==2546778== HEAP SUMMARY: ==2546778== in use at exit: 858,488 bytes in 12,122 blocks ==2546778== total heap usage: 474,830 allocs, 462,708 frees, 1,650,634,943 bytes allocated ==2546778== ==2546778== LEAK SUMMARY: ==2546778== definitely lost: 0 bytes in 0 blocks ==2546778== indirectly lost: 0 bytes in 0 blocks ==2546778== possibly lost: 0 bytes in 0 blocks ==2546778== still reachable: 24 bytes in 2 blocks ==2546778== suppressed: 858,464 bytes in 12,120 blocks ==2546778== Reachable blocks (those to which a pointer was found) are not shown. ==2546778== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2546778== ==2546778== For lists of detected and suppressed errors, rerun with: -s ==2546778== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 47 from 21)