==2548329== Memcheck, a memory error detector ==2548329== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2548329== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2548329== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==2548329== Parent PID: 2537244 ==2548329== ==2548329== ==2548329== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2548329== Open file descriptor 12: ==2548329== at 0xA56326D: pipe (pipe.c:29) ==2548329== by 0x143EC07D: ??? ==2548329== by 0xFB8C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2548329== by 0xBC5D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2548329== by 0xBBF6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2548329== by 0xA8EDD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2548329== by 0xA1912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2548329== by 0xA19132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2548329== by 0x124280: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2548329== by 0x11DACD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2548329== by 0x1204C0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2548329== by 0x120360: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2548329== by 0x1209F7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2548329== by 0x11BEF5: main (TestHdf5ToVisualizerConverters.cpp:19) ==2548329== ==2548329== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2548329== at 0xA567C0C: __open_nocancel (open64_nocancel.c:39) ==2548329== by 0xA4EBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2548329== by 0xA1C6822: ??? ==2548329== by 0xA1C696F: ??? ==2548329== by 0xFC316DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2548329== by 0xFC31938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2548329== by 0xFBE7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2548329== by 0xFB8C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2548329== by 0xBC5D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2548329== by 0xBBF6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2548329== by 0xA8EDD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2548329== by 0xA1912DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2548329== by 0xA19132D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2548329== by 0x124280: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2548329== by 0x11DACD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2548329== by 0x1204C0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2548329== by 0x120360: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2548329== by 0x1209F7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2548329== by 0x11BEF5: main (TestHdf5ToVisualizerConverters.cpp:19) ==2548329== ==2548329== Open file descriptor 115: ==2548329== ==2548329== ==2548329== Open file descriptor 112: ==2548329== ==2548329== ==2548329== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==2548329== ==2548329== ==2548329== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2548329== ==2548329== ==2548329== ==2548329== HEAP SUMMARY: ==2548329== in use at exit: 858,008 bytes in 12,112 blocks ==2548329== total heap usage: 131,688 allocs, 119,576 frees, 1,571,553,339 bytes allocated ==2548329== ==2548329== LEAK SUMMARY: ==2548329== definitely lost: 0 bytes in 0 blocks ==2548329== indirectly lost: 0 bytes in 0 blocks ==2548329== possibly lost: 0 bytes in 0 blocks ==2548329== still reachable: 24 bytes in 2 blocks ==2548329== suppressed: 857,984 bytes in 12,110 blocks ==2548329== Reachable blocks (those to which a pointer was found) are not shown. ==2548329== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2548329== ==2548329== For lists of detected and suppressed errors, rerun with: -s ==2548329== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 21 from 21)