==2538943== Memcheck, a memory error detector ==2538943== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2538943== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2538943== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMutableVertexMeshOperationsWithPopulationSrn -malloc_debug -malloc_dump -memory_info ==2538943== Parent PID: 2537244 ==2538943== ==2538943== ==2538943== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2538943== Open file descriptor 12: ==2538943== at 0x1096226D: pipe (pipe.c:29) ==2538943== by 0x1976C07D: ??? ==2538943== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2538943== by 0x105B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2538943== by 0x1054AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2538943== by 0xF21ED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2538943== by 0xF0F52DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2538943== by 0xF0F532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2538943== by 0x12F99F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2538943== by 0x12AA93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2538943== by 0x12D240: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2538943== by 0x12D13C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2538943== by 0x12D74F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2538943== by 0x129295: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==2538943== ==2538943== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2538943== at 0x10966C0C: __open_nocancel (open64_nocancel.c:39) ==2538943== by 0x108EABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2538943== by 0x104A8822: ??? ==2538943== by 0x104A896F: ??? ==2538943== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2538943== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2538943== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2538943== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2538943== by 0x105B1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2538943== by 0x1054AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2538943== by 0xF21ED38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2538943== by 0xF0F52DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2538943== by 0xF0F532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2538943== by 0x12F99F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2538943== by 0x12AA93: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2538943== by 0x12D240: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2538943== by 0x12D13C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2538943== by 0x12D74F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2538943== by 0x129295: main (TestMutableVertexMeshOperationsWithPopulationSrn.cpp:18) ==2538943== ==2538943== Open file descriptor 115: ==2538943== ==2538943== ==2538943== Open file descriptor 112: ==2538943== ==2538943== ==2538943== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMutableVertexMeshOperationsWithPopulationSrn_valgrind.txt ==2538943== ==2538943== ==2538943== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2538943== ==2538943== ==2538943== ==2538943== HEAP SUMMARY: ==2538943== in use at exit: 858,024 bytes in 12,113 blocks ==2538943== total heap usage: 69,445 allocs, 57,332 frees, 1,543,777,840 bytes allocated ==2538943== ==2538943== LEAK SUMMARY: ==2538943== definitely lost: 0 bytes in 0 blocks ==2538943== indirectly lost: 0 bytes in 0 blocks ==2538943== possibly lost: 0 bytes in 0 blocks ==2538943== still reachable: 56 bytes in 3 blocks ==2538943== suppressed: 857,968 bytes in 12,110 blocks ==2538943== Reachable blocks (those to which a pointer was found) are not shown. ==2538943== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2538943== ==2538943== For lists of detected and suppressed errors, rerun with: -s ==2538943== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)