==1863902== Memcheck, a memory error detector ==1863902== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1863902== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1863902== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHdf5ToVisualizerConverters -malloc_debug -malloc_dump -memory_info ==1863902== Parent PID: 1845414 ==1863902== ==1863902== ==1863902== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1863902== Open file descriptor 12: ==1863902== at 0xA8B007D: pipe (pipe.c:29) ==1863902== by 0x1432A07D: ??? ==1863902== by 0xFB324CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1863902== by 0xBFA9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1863902== by 0xBF42D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1863902== by 0xAC39D38: PetscInitialize (pinit.c:924) ==1863902== by 0xA1942DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1863902== by 0xA19432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1863902== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1863902== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1863902== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1863902== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1863902== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1863902== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==1863902== ==1863902== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1863902== at 0xA8B4A1C: __open_nocancel (open64_nocancel.c:39) ==1863902== by 0xA838BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1863902== by 0xA1C9822: ??? ==1863902== by 0xA1C996F: ??? ==1863902== by 0xFBD76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1863902== by 0xFBD7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1863902== by 0xFB8D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1863902== by 0xFB322DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1863902== by 0xBFA9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1863902== by 0xBF42D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1863902== by 0xAC39D38: PetscInitialize (pinit.c:924) ==1863902== by 0xA1942DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1863902== by 0xA19432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1863902== by 0x124324: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1863902== by 0x11DB0D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1863902== by 0x120564: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1863902== by 0x120404: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1863902== by 0x120A9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1863902== by 0x11BF35: main (TestHdf5ToVisualizerConverters.cpp:19) ==1863902== ==1863902== Open file descriptor 115: ==1863902== ==1863902== ==1863902== Open file descriptor 112: ==1863902== ==1863902== ==1863902== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5ToVisualizerConverters_valgrind.txt ==1863902== ==1863902== ==1863902== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1863902== ==1863902== ==1863902== ==1863902== HEAP SUMMARY: ==1863902== in use at exit: 995,569 bytes in 13,913 blocks ==1863902== total heap usage: 135,706 allocs, 121,793 frees, 1,600,168,470 bytes allocated ==1863902== ==1863902== LEAK SUMMARY: ==1863902== definitely lost: 0 bytes in 0 blocks ==1863902== indirectly lost: 0 bytes in 0 blocks ==1863902== possibly lost: 0 bytes in 0 blocks ==1863902== still reachable: 24 bytes in 2 blocks ==1863902== suppressed: 995,545 bytes in 13,911 blocks ==1863902== Reachable blocks (those to which a pointer was found) are not shown. ==1863902== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1863902== ==1863902== For lists of detected and suppressed errors, rerun with: -s ==1863902== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)