==1861277== Memcheck, a memory error detector ==1861277== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1861277== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1861277== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==1861277== Parent PID: 1845414 ==1861277== ==1861277== ==1861277== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1861277== Open file descriptor 12: ==1861277== at 0x10B9B07D: pipe (pipe.c:29) ==1861277== by 0x1B37007D: ??? ==1861277== by 0x155154CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1861277== by 0x104A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1861277== by 0x1043CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1861277== by 0xF133D38: PetscInitialize (pinit.c:924) ==1861277== by 0xEFA22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1861277== by 0xEFA232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1861277== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1861277== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1861277== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1861277== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1861277== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1861277== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==1861277== ==1861277== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1861277== at 0x10B9FA1C: __open_nocancel (open64_nocancel.c:39) ==1861277== by 0x10B23BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1861277== by 0xEFD7822: ??? ==1861277== by 0xEFD796F: ??? ==1861277== by 0x155BA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1861277== by 0x155BA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1861277== by 0x15570922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1861277== by 0x155152DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1861277== by 0x104A3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1861277== by 0x1043CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1861277== by 0xF133D38: PetscInitialize (pinit.c:924) ==1861277== by 0xEFA22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1861277== by 0xEFA232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1861277== by 0x192669: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1861277== by 0x18A60B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1861277== by 0x18DC08: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1861277== by 0x18DAA8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1861277== by 0x18E13F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1861277== by 0x186F35: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==1861277== ==1861277== Open file descriptor 115: ==1861277== ==1861277== ==1861277== Open file descriptor 112: ==1861277== ==1861277== ==1861277== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==1861277== ==1861277== ==1861277== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1861277== ==1861277== ==1861277== ==1861277== HEAP SUMMARY: ==1861277== in use at exit: 995,665 bytes in 13,915 blocks ==1861277== total heap usage: 874,670 allocs, 860,755 frees, 1,693,991,845 bytes allocated ==1861277== ==1861277== LEAK SUMMARY: ==1861277== definitely lost: 0 bytes in 0 blocks ==1861277== indirectly lost: 0 bytes in 0 blocks ==1861277== possibly lost: 0 bytes in 0 blocks ==1861277== still reachable: 120 bytes in 4 blocks ==1861277== suppressed: 995,545 bytes in 13,911 blocks ==1861277== Reachable blocks (those to which a pointer was found) are not shown. ==1861277== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1861277== ==1861277== For lists of detected and suppressed errors, rerun with: -s ==1861277== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)