==1847867== Memcheck, a memory error detector ==1847867== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1847867== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1847867== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1847867== Parent PID: 1845414 ==1847867== ==1847867== ==1847867== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1847867== Open file descriptor 12: ==1847867== at 0xFCC207D: pipe (pipe.c:29) ==1847867== by 0x196AD07D: ??? ==1847867== by 0x14CB44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1847867== by 0x11582418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1847867== by 0x1151BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1847867== by 0x10212D38: PetscInitialize (pinit.c:924) ==1847867== by 0xF4972DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1847867== by 0xF49732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1847867== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1847867== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1847867== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1847867== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1847867== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1847867== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==1847867== ==1847867== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1847867== at 0xFCC6A1C: __open_nocancel (open64_nocancel.c:39) ==1847867== by 0xFC4ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1847867== by 0xF4CC822: ??? ==1847867== by 0xF4CC96F: ??? ==1847867== by 0x14D596DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1847867== by 0x14D59938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1847867== by 0x14D0F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1847867== by 0x14CB42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1847867== by 0x11582418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1847867== by 0x1151BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1847867== by 0x10212D38: PetscInitialize (pinit.c:924) ==1847867== by 0xF4972DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1847867== by 0xF49732D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1847867== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1847867== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1847867== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1847867== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1847867== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1847867== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==1847867== ==1847867== Open file descriptor 115: ==1847867== ==1847867== ==1847867== Open file descriptor 112: ==1847867== ==1847867== ==1847867== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==1847867== ==1847867== ==1847867== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1847867== ==1847867== ==1847867== ==1847867== HEAP SUMMARY: ==1847867== in use at exit: 995,526 bytes in 13,910 blocks ==1847867== total heap usage: 7,508,617 allocs, 7,494,707 frees, 2,877,443,234 bytes allocated ==1847867== ==1847867== LEAK SUMMARY: ==1847867== definitely lost: 0 bytes in 0 blocks ==1847867== indirectly lost: 0 bytes in 0 blocks ==1847867== possibly lost: 0 bytes in 0 blocks ==1847867== still reachable: 56 bytes in 3 blocks ==1847867== suppressed: 995,470 bytes in 13,907 blocks ==1847867== Reachable blocks (those to which a pointer was found) are not shown. ==1847867== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1847867== ==1847867== For lists of detected and suppressed errors, rerun with: -s ==1847867== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)