==1847873== Memcheck, a memory error detector ==1847873== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1847873== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1847873== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1847873== Parent PID: 1845414 ==1847873== ==1847873== ==1847873== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1847873== Open file descriptor 12: ==1847873== at 0x10DDA07D: pipe (pipe.c:29) ==1847873== by 0x196AE07D: ??? ==1847873== by 0x14C154CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1847873== by 0x105FB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1847873== by 0x10594D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1847873== by 0xF28BD38: PetscInitialize (pinit.c:924) ==1847873== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1847873== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1847873== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1847873== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1847873== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1847873== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1847873== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1847873== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==1847873== ==1847873== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1847873== at 0x10DDEA1C: __open_nocancel (open64_nocancel.c:39) ==1847873== by 0x10D62BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1847873== by 0xF12F822: ??? ==1847873== by 0xF12F96F: ??? ==1847873== by 0x14CBC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1847873== by 0x14CBC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1847873== by 0x14C72922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1847873== by 0x14C152DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1847873== by 0x105FB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1847873== by 0x10594D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1847873== by 0xF28BD38: PetscInitialize (pinit.c:924) ==1847873== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1847873== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1847873== by 0x1FFF0F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1847873== by 0x1F9AB9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1847873== by 0x1FD424: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1847873== by 0x1FD2C4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1847873== by 0x1FD95B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1847873== by 0x1F7ED5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==1847873== ==1847873== Open file descriptor 115: ==1847873== ==1847873== ==1847873== Open file descriptor 112: ==1847873== ==1847873== ==1847873== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==1847873== ==1847873== ==1847873== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1847873== ==1847873== ==1847873== ==1847873== HEAP SUMMARY: ==1847873== in use at exit: 995,526 bytes in 13,910 blocks ==1847873== total heap usage: 9,762,222 allocs, 9,748,312 frees, 2,834,858,722 bytes allocated ==1847873== ==1847873== LEAK SUMMARY: ==1847873== definitely lost: 0 bytes in 0 blocks ==1847873== indirectly lost: 0 bytes in 0 blocks ==1847873== possibly lost: 0 bytes in 0 blocks ==1847873== still reachable: 56 bytes in 3 blocks ==1847873== suppressed: 995,470 bytes in 13,907 blocks ==1847873== Reachable blocks (those to which a pointer was found) are not shown. ==1847873== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1847873== ==1847873== For lists of detected and suppressed errors, rerun with: -s ==1847873== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)