==1848416== Memcheck, a memory error detector ==1848416== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1848416== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1848416== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1848416== Parent PID: 1845414 ==1848416== ==1848416== ==1848416== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1848416== Open file descriptor 12: ==1848416== at 0xF92507D: pipe (pipe.c:29) ==1848416== by 0x196AE07D: ??? ==1848416== by 0x14CB54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1848416== by 0x11582418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1848416== by 0x1151BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1848416== by 0x10212D38: PetscInitialize (pinit.c:924) ==1848416== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1848416== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1848416== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1848416== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1848416== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1848416== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1848416== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1848416== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1848416== ==1848416== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1848416== at 0xF929A1C: __open_nocancel (open64_nocancel.c:39) ==1848416== by 0xF8ADBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1848416== by 0xF12F822: ??? ==1848416== by 0xF12F96F: ??? ==1848416== by 0x14D5A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1848416== by 0x14D5A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1848416== by 0x14D10922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1848416== by 0x14CB52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1848416== by 0x11582418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1848416== by 0x1151BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1848416== by 0x10212D38: PetscInitialize (pinit.c:924) ==1848416== by 0xF0FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1848416== by 0xF0FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1848416== by 0x1D7654: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1848416== by 0x1CF139: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1848416== by 0x1D29B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1848416== by 0x1D2858: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1848416== by 0x1D2EEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1848416== by 0x1CD555: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1848416== ==1848416== Open file descriptor 115: ==1848416== ==1848416== ==1848416== Open file descriptor 112: ==1848416== ==1848416== ==1848416== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==1848416== ==1848416== ==1848416== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1848416== ==1848416== ==1848416== ==1848416== HEAP SUMMARY: ==1848416== in use at exit: 995,542 bytes in 13,911 blocks ==1848416== total heap usage: 11,699,493 allocs, 11,685,582 frees, 2,442,446,276 bytes allocated ==1848416== ==1848416== LEAK SUMMARY: ==1848416== definitely lost: 0 bytes in 0 blocks ==1848416== indirectly lost: 0 bytes in 0 blocks ==1848416== possibly lost: 0 bytes in 0 blocks ==1848416== still reachable: 72 bytes in 4 blocks ==1848416== suppressed: 995,470 bytes in 13,907 blocks ==1848416== Reachable blocks (those to which a pointer was found) are not shown. ==1848416== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1848416== ==1848416== For lists of detected and suppressed errors, rerun with: -s ==1848416== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)