==1861126== Memcheck, a memory error detector ==1861126== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1861126== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1861126== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1861126== Parent PID: 1845414 ==1861126== ==1861126== ==1861126== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1861126== Open file descriptor 12: ==1861126== at 0xDB9F07D: pipe (pipe.c:29) ==1861126== by 0x196AE07D: ??? ==1861126== by 0x14CBE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1861126== by 0x1149B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1861126== by 0x11434D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1861126== by 0x1012BD38: PetscInitialize (pinit.c:924) ==1861126== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1861126== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1861126== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1861126== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1861126== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1861126== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1861126== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1861126== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1861126== ==1861126== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1861126== at 0xDBA3A1C: __open_nocancel (open64_nocancel.c:39) ==1861126== by 0xDB27BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1861126== by 0xD4D2822: ??? ==1861126== by 0xD4D296F: ??? ==1861126== by 0x14D636DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1861126== by 0x14D63938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1861126== by 0x14D19922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1861126== by 0x14CBE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1861126== by 0x1149B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1861126== by 0x11434D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1861126== by 0x1012BD38: PetscInitialize (pinit.c:924) ==1861126== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1861126== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1861126== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1861126== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1861126== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1861126== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1861126== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1861126== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1861126== ==1861126== Open file descriptor 115: ==1861126== ==1861126== ==1861126== Open file descriptor 112: ==1861126== ==1861126== ==1861126== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==1861126== ==1861126== ==1861126== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1861126== ==1861126== ==1861126== ==1861126== HEAP SUMMARY: ==1861126== in use at exit: 995,526 bytes in 13,910 blocks ==1861126== total heap usage: 40,701,843 allocs, 40,687,933 frees, 4,063,995,512 bytes allocated ==1861126== ==1861126== LEAK SUMMARY: ==1861126== definitely lost: 0 bytes in 0 blocks ==1861126== indirectly lost: 0 bytes in 0 blocks ==1861126== possibly lost: 0 bytes in 0 blocks ==1861126== still reachable: 56 bytes in 3 blocks ==1861126== suppressed: 995,470 bytes in 13,907 blocks ==1861126== Reachable blocks (those to which a pointer was found) are not shown. ==1861126== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1861126== ==1861126== For lists of detected and suppressed errors, rerun with: -s ==1861126== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)