==3504739== Memcheck, a memory error detector ==3504739== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3504739== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3504739== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==3504739== Parent PID: 3504736 ==3504739== ==3504739== ==3504739== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3504739== Open file descriptor 12: ==3504739== at 0x4CBD07D: pipe (pipe.c:29) ==3504739== by 0xAEA507D: ??? ==3504739== by 0x89C74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3504739== by 0x627A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3504739== by 0x6213D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3504739== by 0x4F0AD38: PetscInitialize (pinit.c:924) ==3504739== by 0x48FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3504739== by 0x48FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3504739== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==3504739== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==3504739== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==3504739== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==3504739== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==3504739== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==3504739== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3504739== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3504739== by 0x110C15: main (TestCitations.cpp:18) ==3504739== ==3504739== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3504739== at 0x4CC1A1C: __open_nocancel (open64_nocancel.c:39) ==3504739== by 0x4C45BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3504739== by 0x4935822: ??? ==3504739== by 0x493596F: ??? ==3504739== by 0x8A6C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3504739== by 0x8A6C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3504739== by 0x8A22922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3504739== by 0x89C72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3504739== by 0x627A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3504739== by 0x6213D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3504739== by 0x4F0AD38: PetscInitialize (pinit.c:924) ==3504739== by 0x48FA2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3504739== by 0x48FA32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3504739== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==3504739== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==3504739== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==3504739== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==3504739== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==3504739== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==3504739== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3504739== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3504739== by 0x110C15: main (TestCitations.cpp:18) ==3504739== ==3504739== Open file descriptor 115: ==3504739== ==3504739== ==3504739== Open file descriptor 112: ==3504739== ==3504739== ==3504739== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==3504739== ==3504739== ==3504739== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3504739== ==3504739== ==3504739== ==3504739== HEAP SUMMARY: ==3504739== in use at exit: 835,137 bytes in 11,676 blocks ==3504739== total heap usage: 53,625 allocs, 41,949 frees, 1,540,069,464 bytes allocated ==3504739== ==3504739== LEAK SUMMARY: ==3504739== definitely lost: 0 bytes in 0 blocks ==3504739== indirectly lost: 0 bytes in 0 blocks ==3504739== possibly lost: 0 bytes in 0 blocks ==3504739== still reachable: 24 bytes in 2 blocks ==3504739== suppressed: 835,113 bytes in 11,674 blocks ==3504739== Reachable blocks (those to which a pointer was found) are not shown. ==3504739== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3504739== ==3504739== For lists of detected and suppressed errors, rerun with: -s ==3504739== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)