==3506544== Memcheck, a memory error detector ==3506544== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3506544== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3506544== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==3506544== Parent PID: 3504736 ==3506544== ==3506544== ==3506544== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3506544== Open file descriptor 12: ==3506544== at 0x10DE807D: pipe (pipe.c:29) ==3506544== by 0x196B107D: ??? ==3506544== by 0x14C224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3506544== by 0x10609418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3506544== by 0x105A2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3506544== by 0xF299D38: PetscInitialize (pinit.c:924) ==3506544== by 0xF1002DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3506544== by 0xF10032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3506544== by 0x16AB57: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3506544== by 0x162E49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3506544== by 0x166190: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3506544== by 0x166030: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3506544== by 0x1666C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3506544== by 0x161265: main (TestPottsBasedCellPopulation.cpp:19) ==3506544== ==3506544== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3506544== at 0x10DECA1C: __open_nocancel (open64_nocancel.c:39) ==3506544== by 0x10D70BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3506544== by 0xF13B822: ??? ==3506544== by 0xF13B96F: ??? ==3506544== by 0x14CC76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3506544== by 0x14CC7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3506544== by 0x14C7D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3506544== by 0x14C222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3506544== by 0x10609418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3506544== by 0x105A2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3506544== by 0xF299D38: PetscInitialize (pinit.c:924) ==3506544== by 0xF1002DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3506544== by 0xF10032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3506544== by 0x16AB57: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3506544== by 0x162E49: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3506544== by 0x166190: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3506544== by 0x166030: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3506544== by 0x1666C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3506544== by 0x161265: main (TestPottsBasedCellPopulation.cpp:19) ==3506544== ==3506544== Open file descriptor 115: ==3506544== ==3506544== ==3506544== Open file descriptor 112: ==3506544== ==3506544== ==3506544== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCellPopulation_valgrind.txt ==3506544== ==3506544== ==3506544== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3506544== ==3506544== ==3506544== ==3506544== HEAP SUMMARY: ==3506544== in use at exit: 835,633 bytes in 11,677 blocks ==3506544== total heap usage: 83,334 allocs, 71,657 frees, 1,545,723,284 bytes allocated ==3506544== ==3506544== LEAK SUMMARY: ==3506544== definitely lost: 0 bytes in 0 blocks ==3506544== indirectly lost: 0 bytes in 0 blocks ==3506544== possibly lost: 0 bytes in 0 blocks ==3506544== still reachable: 56 bytes in 3 blocks ==3506544== suppressed: 835,577 bytes in 11,674 blocks ==3506544== Reachable blocks (those to which a pointer was found) are not shown. ==3506544== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3506544== ==3506544== For lists of detected and suppressed errors, rerun with: -s ==3506544== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)