==3520184== Memcheck, a memory error detector ==3520184== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3520184== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3520184== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==3520184== Parent PID: 3504736 ==3520184== ==3520184== ==3520184== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3520184== Open file descriptor 12: ==3520184== at 0xF80807D: pipe (pipe.c:29) ==3520184== by 0x196B107D: ??? ==3520184== by 0x14CC24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3520184== by 0x114A9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3520184== by 0x11442D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3520184== by 0x10139D38: PetscInitialize (pinit.c:924) ==3520184== by 0xF1002DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3520184== by 0xF10032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3520184== by 0x122D30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3520184== by 0x11E513: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3520184== by 0x120830: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3520184== by 0x12072B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3520184== by 0x120D3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3520184== by 0x11CD15: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==3520184== ==3520184== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3520184== at 0xF80CA1C: __open_nocancel (open64_nocancel.c:39) ==3520184== by 0xF790BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3520184== by 0xF13B822: ??? ==3520184== by 0xF13B96F: ??? ==3520184== by 0x14D676DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3520184== by 0x14D67938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3520184== by 0x14D1D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3520184== by 0x14CC22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3520184== by 0x114A9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3520184== by 0x11442D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3520184== by 0x10139D38: PetscInitialize (pinit.c:924) ==3520184== by 0xF1002DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3520184== by 0xF10032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3520184== by 0x122D30: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3520184== by 0x11E513: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3520184== by 0x120830: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3520184== by 0x12072B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3520184== by 0x120D3F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3520184== by 0x11CD15: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==3520184== ==3520184== Open file descriptor 115: ==3520184== ==3520184== ==3520184== Open file descriptor 112: ==3520184== ==3520184== ==3520184== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==3520184== ==3520184== ==3520184== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3520184== ==3520184== ==3520184== ==3520184== HEAP SUMMARY: ==3520184== in use at exit: 835,564 bytes in 11,673 blocks ==3520184== total heap usage: 5,185,373 allocs, 5,173,700 frees, 1,980,048,708 bytes allocated ==3520184== ==3520184== LEAK SUMMARY: ==3520184== definitely lost: 0 bytes in 0 blocks ==3520184== indirectly lost: 0 bytes in 0 blocks ==3520184== possibly lost: 0 bytes in 0 blocks ==3520184== still reachable: 56 bytes in 3 blocks ==3520184== suppressed: 835,508 bytes in 11,670 blocks ==3520184== Reachable blocks (those to which a pointer was found) are not shown. ==3520184== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3520184== ==3520184== For lists of detected and suppressed errors, rerun with: -s ==3520184== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)