==3520266== Memcheck, a memory error detector ==3520266== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3520266== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3520266== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningImmersedBoundarySimulationsTutorial -malloc_debug -malloc_dump -memory_info ==3520266== Parent PID: 3504736 ==3520266== ==3520266== ==3520266== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3520266== Open file descriptor 12: ==3520266== at 0x10CBF07D: pipe (pipe.c:29) ==3520266== by 0x196B107D: ??? ==3520266== by 0x14C224CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3520266== by 0x105C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3520266== by 0x10560D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3520266== by 0xF229D38: PetscInitialize (pinit.c:924) ==3520266== by 0xF1002DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3520266== by 0xF10032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3520266== by 0x120CF3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3520266== by 0x11C533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3520266== by 0x11E8AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3520266== by 0x11E7A7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3520266== by 0x11EDBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3520266== by 0x11AD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==3520266== ==3520266== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3520266== at 0x10CC3A1C: __open_nocancel (open64_nocancel.c:39) ==3520266== by 0x10C47BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3520266== by 0x104B9822: ??? ==3520266== by 0x104B996F: ??? ==3520266== by 0x14CC76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3520266== by 0x14CC7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3520266== by 0x14C7D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3520266== by 0x14C222DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3520266== by 0x105C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3520266== by 0x10560D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3520266== by 0xF229D38: PetscInitialize (pinit.c:924) ==3520266== by 0xF1002DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3520266== by 0xF10032D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3520266== by 0x120CF3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3520266== by 0x11C533: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3520266== by 0x11E8AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3520266== by 0x11E7A7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3520266== by 0x11EDBB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3520266== by 0x11AD35: main (TestRunningImmersedBoundarySimulationsTutorial.cpp:18) ==3520266== ==3520266== Open file descriptor 115: ==3520266== ==3520266== ==3520266== Open file descriptor 112: ==3520266== ==3520266== ==3520266== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningImmersedBoundarySimulationsTutorial_valgrind.txt ==3520266== ==3520266== ==3520266== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3520266== ==3520266== ==3520266== ==3520266== HEAP SUMMARY: ==3520266== in use at exit: 835,564 bytes in 11,673 blocks ==3520266== total heap usage: 663,568 allocs, 651,895 frees, 1,714,648,082 bytes allocated ==3520266== ==3520266== LEAK SUMMARY: ==3520266== definitely lost: 0 bytes in 0 blocks ==3520266== indirectly lost: 0 bytes in 0 blocks ==3520266== possibly lost: 0 bytes in 0 blocks ==3520266== still reachable: 56 bytes in 3 blocks ==3520266== suppressed: 835,508 bytes in 11,670 blocks ==3520266== Reachable blocks (those to which a pointer was found) are not shown. ==3520266== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3520266== ==3520266== For lists of detected and suppressed errors, rerun with: -s ==3520266== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)