==3506100== Memcheck, a memory error detector ==3506100== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3506100== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3506100== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==3506100== Parent PID: 3504736 ==3506100== ==3506100== ==3506100== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3506100== Open file descriptor 12: ==3506100== at 0x1105C07D: pipe (pipe.c:29) ==3506100== by 0x196B107D: ??? ==3506100== by 0x14C2B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3506100== by 0x10964418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3506100== by 0x108FDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3506100== by 0xF5C6D38: PetscInitialize (pinit.c:924) ==3506100== by 0xF49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3506100== by 0xF49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3506100== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3506100== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3506100== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3506100== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3506100== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3506100== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==3506100== ==3506100== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3506100== at 0x11060A1C: __open_nocancel (open64_nocancel.c:39) ==3506100== by 0x10FE4BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3506100== by 0x10856822: ??? ==3506100== by 0x1085696F: ??? ==3506100== by 0x14CD06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3506100== by 0x14CD0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3506100== by 0x14C86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3506100== by 0x14C2B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3506100== by 0x10964418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3506100== by 0x108FDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3506100== by 0xF5C6D38: PetscInitialize (pinit.c:924) ==3506100== by 0xF49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3506100== by 0xF49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3506100== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3506100== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3506100== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3506100== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3506100== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3506100== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==3506100== ==3506100== Open file descriptor 115: ==3506100== ==3506100== ==3506100== Open file descriptor 112: ==3506100== ==3506100== ==3506100== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==3506100== ==3506100== ==3506100== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3506100== ==3506100== ==3506100== ==3506100== HEAP SUMMARY: ==3506100== in use at exit: 835,564 bytes in 11,673 blocks ==3506100== total heap usage: 7,863,871 allocs, 7,852,198 frees, 2,386,407,489 bytes allocated ==3506100== ==3506100== LEAK SUMMARY: ==3506100== definitely lost: 0 bytes in 0 blocks ==3506100== indirectly lost: 0 bytes in 0 blocks ==3506100== possibly lost: 0 bytes in 0 blocks ==3506100== still reachable: 56 bytes in 3 blocks ==3506100== suppressed: 835,508 bytes in 11,670 blocks ==3506100== Reachable blocks (those to which a pointer was found) are not shown. ==3506100== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3506100== ==3506100== For lists of detected and suppressed errors, rerun with: -s ==3506100== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)