==2589608== Memcheck, a memory error detector ==2589608== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2589608== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2589608== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayRemesher -malloc_debug -malloc_dump -memory_info ==2589608== Parent PID: 2580139 ==2589608== ==2589608== ==2589608== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2589608== Open file descriptor 12: ==2589608== at 0x7EE826D: pipe (pipe.c:29) ==2589608== by 0x108D407D: ??? ==2589608== by 0xC0EF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2589608== by 0x7B37418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589608== by 0x7AD0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589608== by 0x67A4D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2589608== by 0x667B2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2589608== by 0x667B32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2589608== by 0x11A4C3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2589608== by 0x116113: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2589608== by 0x118548: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2589608== by 0x118443: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2589608== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2589608== by 0x114915: main (TestAirwayRemesher.cpp:18) ==2589608== ==2589608== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2589608== at 0x7EECC0C: __open_nocancel (open64_nocancel.c:39) ==2589608== by 0x7E70BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2589608== by 0x7A2E822: ??? ==2589608== by 0x7A2E96F: ??? ==2589608== by 0xC1946DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2589608== by 0xC194938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2589608== by 0xC14A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2589608== by 0xC0EF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2589608== by 0x7B37418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589608== by 0x7AD0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589608== by 0x67A4D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2589608== by 0x667B2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2589608== by 0x667B32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2589608== by 0x11A4C3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2589608== by 0x116113: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2589608== by 0x118548: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2589608== by 0x118443: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2589608== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2589608== by 0x114915: main (TestAirwayRemesher.cpp:18) ==2589608== ==2589608== Open file descriptor 115: ==2589608== ==2589608== ==2589608== Open file descriptor 112: ==2589608== ==2589608== ==2589608== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayRemesher_valgrind.txt ==2589608== ==2589608== ==2589608== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2589608== ==2589608== ==2589608== ==2589608== HEAP SUMMARY: ==2589608== in use at exit: 857,929 bytes in 12,108 blocks ==2589608== total heap usage: 11,605,686 allocs, 11,593,578 frees, 2,001,985,395 bytes allocated ==2589608== ==2589608== LEAK SUMMARY: ==2589608== definitely lost: 0 bytes in 0 blocks ==2589608== indirectly lost: 0 bytes in 0 blocks ==2589608== possibly lost: 0 bytes in 0 blocks ==2589608== still reachable: 24 bytes in 2 blocks ==2589608== suppressed: 857,905 bytes in 12,106 blocks ==2589608== Reachable blocks (those to which a pointer was found) are not shown. ==2589608== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2589608== ==2589608== For lists of detected and suppressed errors, rerun with: -s ==2589608== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 17 from 17)