==2589732== Memcheck, a memory error detector ==2589732== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2589732== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2589732== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithBathProblem -malloc_debug -malloc_dump -memory_info ==2589732== Parent PID: 2580139 ==2589732== ==2589732== ==2589732== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2589732== Open file descriptor 12: ==2589732== at 0xA92526D: pipe (pipe.c:29) ==2589732== by 0x143F407D: ??? ==2589732== by 0xFB924CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2589732== by 0xC01F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589732== by 0xBFB8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589732== by 0xACADD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2589732== by 0xA46A2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2589732== by 0xA46A32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2589732== by 0x1420E6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2589732== by 0x13BB4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2589732== by 0x13F0A8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2589732== by 0x13EF48: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2589732== by 0x13F5DF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2589732== by 0x139DD5: main (TestBidomainWithBathProblem.cpp:19) ==2589732== ==2589732== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2589732== at 0xA929C0C: __open_nocancel (open64_nocancel.c:39) ==2589732== by 0xA8ADBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2589732== by 0xA49F822: ??? ==2589732== by 0xA49F96F: ??? ==2589732== by 0xFC376DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2589732== by 0xFC37938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2589732== by 0xFBED922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2589732== by 0xFB922DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2589732== by 0xC01F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589732== by 0xBFB8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589732== by 0xACADD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2589732== by 0xA46A2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2589732== by 0xA46A32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2589732== by 0x1420E6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2589732== by 0x13BB4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2589732== by 0x13F0A8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2589732== by 0x13EF48: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2589732== by 0x13F5DF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2589732== by 0x139DD5: main (TestBidomainWithBathProblem.cpp:19) ==2589732== ==2589732== Open file descriptor 115: ==2589732== ==2589732== ==2589732== Open file descriptor 112: ==2589732== ==2589732== ==2589732== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithBathProblem_valgrind.txt ==2589732== ==2589732== ==2589732== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2589732== ==2589732== ==2589732== ==2589732== HEAP SUMMARY: ==2589732== in use at exit: 858,425 bytes in 12,118 blocks ==2589732== total heap usage: 1,406,306 allocs, 1,394,188 frees, 2,192,989,720 bytes allocated ==2589732== ==2589732== LEAK SUMMARY: ==2589732== definitely lost: 0 bytes in 0 blocks ==2589732== indirectly lost: 0 bytes in 0 blocks ==2589732== possibly lost: 0 bytes in 0 blocks ==2589732== still reachable: 24 bytes in 2 blocks ==2589732== suppressed: 858,401 bytes in 12,116 blocks ==2589732== Reachable blocks (those to which a pointer was found) are not shown. ==2589732== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2589732== ==2589732== For lists of detected and suppressed errors, rerun with: -s ==2589732== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 55 from 20)