==2589751== Memcheck, a memory error detector ==2589751== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2589751== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2589751== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainWithSvi -malloc_debug -malloc_dump -memory_info ==2589751== Parent PID: 2580139 ==2589751== ==2589751== ==2589751== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2589751== Open file descriptor 12: ==2589751== at 0xA4A226D: pipe (pipe.c:29) ==2589751== by 0x143F207D: ??? ==2589751== by 0xFB9F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2589751== by 0xBB9A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589751== by 0xBB33D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589751== by 0xA82AD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2589751== by 0xA0CE2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2589751== by 0xA0CE32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2589751== by 0x120DFE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2589751== by 0x11C633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2589751== by 0x11E9EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2589751== by 0x11E8E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2589751== by 0x11EEFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2589751== by 0x11AE35: main (TestBidomainWithSvi.cpp:18) ==2589751== ==2589751== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2589751== at 0xA4A6C0C: __open_nocancel (open64_nocancel.c:39) ==2589751== by 0xA42ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2589751== by 0xA103822: ??? ==2589751== by 0xA10396F: ??? ==2589751== by 0xFC446DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2589751== by 0xFC44938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2589751== by 0xFBFA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2589751== by 0xFB9F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2589751== by 0xBB9A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589751== by 0xBB33D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589751== by 0xA82AD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2589751== by 0xA0CE2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2589751== by 0xA0CE32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2589751== by 0x120DFE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2589751== by 0x11C633: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2589751== by 0x11E9EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2589751== by 0x11E8E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2589751== by 0x11EEFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2589751== by 0x11AE35: main (TestBidomainWithSvi.cpp:18) ==2589751== ==2589751== Open file descriptor 115: ==2589751== ==2589751== ==2589751== Open file descriptor 112: ==2589751== ==2589751== ==2589751== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainWithSvi_valgrind.txt ==2589751== ==2589751== ==2589751== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2589751== ==2589751== ==2589751== ==2589751== HEAP SUMMARY: ==2589751== in use at exit: 858,425 bytes in 12,118 blocks ==2589751== total heap usage: 3,548,854 allocs, 3,536,736 frees, 2,251,124,018 bytes allocated ==2589751== ==2589751== LEAK SUMMARY: ==2589751== definitely lost: 0 bytes in 0 blocks ==2589751== indirectly lost: 0 bytes in 0 blocks ==2589751== possibly lost: 0 bytes in 0 blocks ==2589751== still reachable: 24 bytes in 2 blocks ==2589751== suppressed: 858,401 bytes in 12,116 blocks ==2589751== Reachable blocks (those to which a pointer was found) are not shown. ==2589751== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2589751== ==2589751== For lists of detected and suppressed errors, rerun with: -s ==2589751== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 58 from 20)