==2581743== Memcheck, a memory error detector ==2581743== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2581743== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2581743== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==2581743== Parent PID: 2580139 ==2581743== ==2581743== ==2581743== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2581743== Open file descriptor 12: ==2581743== at 0xD89526D: pipe (pipe.c:29) ==2581743== by 0x1977507D: ??? ==2581743== by 0x14D124CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2581743== by 0x11153418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2581743== by 0x110ECD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2581743== by 0xFDE1D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2581743== by 0xD4992DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2581743== by 0xD49932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2581743== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2581743== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2581743== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2581743== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2581743== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2581743== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==2581743== ==2581743== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2581743== at 0xD899C0C: __open_nocancel (open64_nocancel.c:39) ==2581743== by 0xD81DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2581743== by 0xD4CE822: ??? ==2581743== by 0xD4CE96F: ??? ==2581743== by 0x14DB76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2581743== by 0x14DB7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2581743== by 0x14D6D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2581743== by 0x14D122DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2581743== by 0x11153418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2581743== by 0x110ECD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2581743== by 0xFDE1D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2581743== by 0xD4992DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2581743== by 0xD49932D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2581743== by 0x132AA2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2581743== by 0x12BE03: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2581743== by 0x12E8F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2581743== by 0x12E7EF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2581743== by 0x12EE03: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2581743== by 0x12A605: main (TestCaUpdateRules.cpp:18) ==2581743== ==2581743== Open file descriptor 115: ==2581743== ==2581743== ==2581743== Open file descriptor 112: ==2581743== ==2581743== ==2581743== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==2581743== ==2581743== ==2581743== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2581743== ==2581743== ==2581743== ==2581743== HEAP SUMMARY: ==2581743== in use at exit: 858,024 bytes in 12,113 blocks ==2581743== total heap usage: 64,379 allocs, 52,266 frees, 1,543,651,298 bytes allocated ==2581743== ==2581743== LEAK SUMMARY: ==2581743== definitely lost: 0 bytes in 0 blocks ==2581743== indirectly lost: 0 bytes in 0 blocks ==2581743== possibly lost: 0 bytes in 0 blocks ==2581743== still reachable: 56 bytes in 3 blocks ==2581743== suppressed: 857,968 bytes in 12,110 blocks ==2581743== Reachable blocks (those to which a pointer was found) are not shown. ==2581743== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2581743== ==2581743== For lists of detected and suppressed errors, rerun with: -s ==2581743== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)