==2588763== Memcheck, a memory error detector ==2588763== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2588763== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2588763== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==2588763== Parent PID: 2580139 ==2588763== ==2588763== ==2588763== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2588763== Open file descriptor 12: ==2588763== at 0x109AD26D: pipe (pipe.c:29) ==2588763== by 0x1977607D: ??? ==2588763== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2588763== by 0x105FA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2588763== by 0x10593D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2588763== by 0xF28AD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2588763== by 0xF0FC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2588763== by 0xF0FC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2588763== by 0x1498E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2588763== by 0x144299: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2588763== by 0x146F2E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2588763== by 0x146DCE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2588763== by 0x147465: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2588763== by 0x1426B5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==2588763== ==2588763== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2588763== at 0x109B1C0C: __open_nocancel (open64_nocancel.c:39) ==2588763== by 0x10935BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2588763== by 0xF131822: ??? ==2588763== by 0xF13196F: ??? ==2588763== by 0x14D676DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2588763== by 0x14D67938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2588763== by 0x14D1D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2588763== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2588763== by 0x105FA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2588763== by 0x10593D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2588763== by 0xF28AD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2588763== by 0xF0FC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2588763== by 0xF0FC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2588763== by 0x1498E3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2588763== by 0x144299: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2588763== by 0x146F2E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2588763== by 0x146DCE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2588763== by 0x147465: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2588763== by 0x1426B5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==2588763== ==2588763== Open file descriptor 115: ==2588763== ==2588763== ==2588763== Open file descriptor 112: ==2588763== ==2588763== ==2588763== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==2588763== ==2588763== ==2588763== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2588763== ==2588763== ==2588763== ==2588763== HEAP SUMMARY: ==2588763== in use at exit: 857,961 bytes in 12,109 blocks ==2588763== total heap usage: 4,271,667 allocs, 4,259,558 frees, 2,103,036,398 bytes allocated ==2588763== ==2588763== LEAK SUMMARY: ==2588763== definitely lost: 0 bytes in 0 blocks ==2588763== indirectly lost: 0 bytes in 0 blocks ==2588763== possibly lost: 0 bytes in 0 blocks ==2588763== still reachable: 56 bytes in 3 blocks ==2588763== suppressed: 857,905 bytes in 12,106 blocks ==2588763== Reachable blocks (those to which a pointer was found) are not shown. ==2588763== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2588763== ==2588763== For lists of detected and suppressed errors, rerun with: -s ==2588763== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)