==2588886== Memcheck, a memory error detector ==2588886== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2588886== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2588886== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==2588886== Parent PID: 2580139 ==2588886== ==2588886== ==2588886== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2588886== Open file descriptor 12: ==2588886== at 0x10CD726D: pipe (pipe.c:29) ==2588886== by 0x1977407D: ??? ==2588886== by 0x14D114CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2588886== by 0x1083D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2588886== by 0x107D6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2588886== by 0xF4CDD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2588886== by 0xF33F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2588886== by 0xF33F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2588886== by 0x260FE5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2588886== by 0x25974B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2588886== by 0x25E26A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2588886== by 0x25E10B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2588886== by 0x25E7A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2588886== by 0x255DB5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2588886== ==2588886== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2588886== at 0x10CDBC0C: __open_nocancel (open64_nocancel.c:39) ==2588886== by 0x10C5FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2588886== by 0xF374822: ??? ==2588886== by 0xF37496F: ??? ==2588886== by 0x14DB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2588886== by 0x14DB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2588886== by 0x14D6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2588886== by 0x14D112DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2588886== by 0x1083D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2588886== by 0x107D6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2588886== by 0xF4CDD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2588886== by 0xF33F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2588886== by 0xF33F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2588886== by 0x260FE5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2588886== by 0x25974B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2588886== by 0x25E26A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2588886== by 0x25E10B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2588886== by 0x25E7A1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2588886== by 0x255DB5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2588886== ==2588886== Open file descriptor 115: ==2588886== ==2588886== ==2588886== Open file descriptor 112: ==2588886== ==2588886== ==2588886== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==2588886== ==2588886== ==2588886== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2588886== ==2588886== ==2588886== ==2588886== HEAP SUMMARY: ==2588886== in use at exit: 857,961 bytes in 12,109 blocks ==2588886== total heap usage: 3,792,374 allocs, 3,780,265 frees, 1,712,078,641 bytes allocated ==2588886== ==2588886== LEAK SUMMARY: ==2588886== definitely lost: 0 bytes in 0 blocks ==2588886== indirectly lost: 0 bytes in 0 blocks ==2588886== possibly lost: 0 bytes in 0 blocks ==2588886== still reachable: 56 bytes in 3 blocks ==2588886== suppressed: 857,905 bytes in 12,106 blocks ==2588886== Reachable blocks (those to which a pointer was found) are not shown. ==2588886== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2588886== ==2588886== For lists of detected and suppressed errors, rerun with: -s ==2588886== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)