==2581838== Memcheck, a memory error detector ==2581838== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2581838== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2581838== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestDiscreteSystemForceCalculator -malloc_debug -malloc_dump -memory_info ==2581838== Parent PID: 2580139 ==2581838== ==2581838== ==2581838== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2581838== Open file descriptor 12: ==2581838== at 0x1096926D: pipe (pipe.c:29) ==2581838== by 0x1977407D: ??? ==2581838== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2581838== by 0x105B8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2581838== by 0x10551D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2581838== by 0xF225D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2581838== by 0xF0FC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2581838== by 0xF0FC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2581838== by 0x12A28B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2581838== by 0x123EED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2581838== by 0x12691A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2581838== by 0x1267BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2581838== by 0x126E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2581838== by 0x122315: main (TestDiscreteSystemForceCalculator.cpp:19) ==2581838== ==2581838== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2581838== at 0x1096DC0C: __open_nocancel (open64_nocancel.c:39) ==2581838== by 0x108F1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2581838== by 0x104AF822: ??? ==2581838== by 0x104AF96F: ??? ==2581838== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2581838== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2581838== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2581838== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2581838== by 0x105B8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2581838== by 0x10551D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2581838== by 0xF225D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2581838== by 0xF0FC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2581838== by 0xF0FC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2581838== by 0x12A28B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2581838== by 0x123EED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2581838== by 0x12691A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2581838== by 0x1267BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2581838== by 0x126E51: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2581838== by 0x122315: main (TestDiscreteSystemForceCalculator.cpp:19) ==2581838== ==2581838== Open file descriptor 115: ==2581838== ==2581838== ==2581838== Open file descriptor 112: ==2581838== ==2581838== ==2581838== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestDiscreteSystemForceCalculator_valgrind.txt ==2581838== ==2581838== ==2581838== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2581838== ==2581838== ==2581838== ==2581838== HEAP SUMMARY: ==2581838== in use at exit: 858,024 bytes in 12,113 blocks ==2581838== total heap usage: 131,776 allocs, 119,663 frees, 1,549,957,517 bytes allocated ==2581838== ==2581838== LEAK SUMMARY: ==2581838== definitely lost: 0 bytes in 0 blocks ==2581838== indirectly lost: 0 bytes in 0 blocks ==2581838== possibly lost: 0 bytes in 0 blocks ==2581838== still reachable: 56 bytes in 3 blocks ==2581838== suppressed: 857,968 bytes in 12,110 blocks ==2581838== Reachable blocks (those to which a pointer was found) are not shown. ==2581838== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2581838== ==2581838== For lists of detected and suppressed errors, rerun with: -s ==2581838== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 26 from 26)