==2581925== Memcheck, a memory error detector ==2581925== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2581925== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2581925== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==2581925== Parent PID: 2580139 ==2581925== ==2581925== ==2581925== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2581925== Open file descriptor 12: ==2581925== at 0xF59B26D: pipe (pipe.c:29) ==2581925== by 0x1977607D: ??? ==2581925== by 0x14D134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2581925== by 0x1123A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2581925== by 0x111D3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2581925== by 0xFECAD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2581925== by 0xF0FC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2581925== by 0xF0FC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2581925== by 0x12B416: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2581925== by 0x126673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2581925== by 0x128C1A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2581925== by 0x128B16: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2581925== by 0x129129: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2581925== by 0x124E75: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==2581925== ==2581925== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2581925== at 0xF59FC0C: __open_nocancel (open64_nocancel.c:39) ==2581925== by 0xF523BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2581925== by 0xF131822: ??? ==2581925== by 0xF13196F: ??? ==2581925== by 0x14DB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2581925== by 0x14DB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2581925== by 0x14D6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2581925== by 0x14D132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2581925== by 0x1123A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2581925== by 0x111D3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2581925== by 0xFECAD38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2581925== by 0xF0FC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2581925== by 0xF0FC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2581925== by 0x12B416: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2581925== by 0x126673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2581925== by 0x128C1A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2581925== by 0x128B16: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2581925== by 0x129129: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2581925== by 0x124E75: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==2581925== ==2581925== Open file descriptor 115: ==2581925== ==2581925== ==2581925== Open file descriptor 112: ==2581925== ==2581925== ==2581925== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==2581925== ==2581925== ==2581925== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2581925== ==2581925== ==2581925== ==2581925== HEAP SUMMARY: ==2581925== in use at exit: 858,024 bytes in 12,113 blocks ==2581925== total heap usage: 61,712 allocs, 49,599 frees, 1,543,369,723 bytes allocated ==2581925== ==2581925== LEAK SUMMARY: ==2581925== definitely lost: 0 bytes in 0 blocks ==2581925== indirectly lost: 0 bytes in 0 blocks ==2581925== possibly lost: 0 bytes in 0 blocks ==2581925== still reachable: 56 bytes in 3 blocks ==2581925== suppressed: 857,968 bytes in 12,110 blocks ==2581925== Reachable blocks (those to which a pointer was found) are not shown. ==2581925== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2581925== ==2581925== For lists of detected and suppressed errors, rerun with: -s ==2581925== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 23 from 23)