==2589029== Memcheck, a memory error detector ==2589029== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2589029== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2589029== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==2589029== Parent PID: 2580139 ==2589029== ==2589029== ==2589029== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2589029== Open file descriptor 12: ==2589029== at 0x1096926D: pipe (pipe.c:29) ==2589029== by 0x1977407D: ??? ==2589029== by 0x14CC04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2589029== by 0x105B8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589029== by 0x10551D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589029== by 0xF225D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2589029== by 0xF0FC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2589029== by 0xF0FC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2589029== by 0x122229: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2589029== by 0x11D80D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2589029== by 0x11FD98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2589029== by 0x11FC38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2589029== by 0x1202CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2589029== by 0x11BC35: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==2589029== ==2589029== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2589029== at 0x1096DC0C: __open_nocancel (open64_nocancel.c:39) ==2589029== by 0x108F1BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2589029== by 0x104AF822: ??? ==2589029== by 0x104AF96F: ??? ==2589029== by 0x14D656DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2589029== by 0x14D65938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2589029== by 0x14D1B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2589029== by 0x14CC02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2589029== by 0x105B8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589029== by 0x10551D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2589029== by 0xF225D38: PetscInitialize (in /usr/lib/x86_64-linux-gnu/libpetsc_real.so.3.15.5) ==2589029== by 0xF0FC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2589029== by 0xF0FC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2589029== by 0x122229: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2589029== by 0x11D80D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2589029== by 0x11FD98: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2589029== by 0x11FC38: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2589029== by 0x1202CF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2589029== by 0x11BC35: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==2589029== ==2589029== Open file descriptor 115: ==2589029== ==2589029== ==2589029== Open file descriptor 112: ==2589029== ==2589029== ==2589029== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==2589029== ==2589029== ==2589029== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2589029== ==2589029== ==2589029== ==2589029== HEAP SUMMARY: ==2589029== in use at exit: 857,961 bytes in 12,109 blocks ==2589029== total heap usage: 3,259,195 allocs, 3,247,086 frees, 2,463,085,767 bytes allocated ==2589029== ==2589029== LEAK SUMMARY: ==2589029== definitely lost: 0 bytes in 0 blocks ==2589029== indirectly lost: 0 bytes in 0 blocks ==2589029== possibly lost: 0 bytes in 0 blocks ==2589029== still reachable: 56 bytes in 3 blocks ==2589029== suppressed: 857,905 bytes in 12,106 blocks ==2589029== Reachable blocks (those to which a pointer was found) are not shown. ==2589029== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2589029== ==2589029== For lists of detected and suppressed errors, rerun with: -s ==2589029== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 19 from 19)