==3564224== Memcheck, a memory error detector ==3564224== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3564224== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3564224== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==3564224== Parent PID: 3562972 ==3564224== ==3564224== ==3564224== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3564224== Open file descriptor 12: ==3564224== at 0xEF9E07D: pipe (pipe.c:29) ==3564224== by 0x196B307D: ??? ==3564224== by 0x13C634CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3564224== by 0xEBEB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3564224== by 0xEB84D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3564224== by 0xD87BD38: PetscInitialize (pinit.c:924) ==3564224== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3564224== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3564224== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3564224== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3564224== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3564224== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3564224== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3564224== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==3564224== ==3564224== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3564224== at 0xEFA2A1C: __open_nocancel (open64_nocancel.c:39) ==3564224== by 0xEF26BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3564224== by 0xD71D822: ??? ==3564224== by 0xD71D96F: ??? ==3564224== by 0x13D086DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3564224== by 0x13D08938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3564224== by 0x13CBE922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3564224== by 0x13C632DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3564224== by 0xEBEB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3564224== by 0xEB84D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3564224== by 0xD87BD38: PetscInitialize (pinit.c:924) ==3564224== by 0xD6E22DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3564224== by 0xD6E232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3564224== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3564224== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3564224== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3564224== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3564224== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3564224== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==3564224== ==3564224== Open file descriptor 115: ==3564224== ==3564224== ==3564224== Open file descriptor 112: ==3564224== ==3564224== ==3564224== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==3564224== ==3564224== ==3564224== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3564224== ==3564224== ==3564224== ==3564224== HEAP SUMMARY: ==3564224== in use at exit: 835,633 bytes in 11,677 blocks ==3564224== total heap usage: 555,791 allocs, 544,114 frees, 1,546,503,328 bytes allocated ==3564224== ==3564224== LEAK SUMMARY: ==3564224== definitely lost: 0 bytes in 0 blocks ==3564224== indirectly lost: 0 bytes in 0 blocks ==3564224== possibly lost: 0 bytes in 0 blocks ==3564224== still reachable: 56 bytes in 3 blocks ==3564224== suppressed: 835,577 bytes in 11,674 blocks ==3564224== Reachable blocks (those to which a pointer was found) are not shown. ==3564224== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3564224== ==3564224== For lists of detected and suppressed errors, rerun with: -s ==3564224== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)