==3578398== Memcheck, a memory error detector ==3578398== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3578398== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3578398== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==3578398== Parent PID: 3562972 ==3578398== ==3578398== ==3578398== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3578398== Open file descriptor 12: ==3578398== at 0x1102D07D: pipe (pipe.c:29) ==3578398== by 0x196B307D: ??? ==3578398== by 0x14C774CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3578398== by 0x1084E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3578398== by 0x107E7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3578398== by 0xF4DED38: PetscInitialize (pinit.c:924) ==3578398== by 0xF3452DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3578398== by 0xF34532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3578398== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3578398== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3578398== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3578398== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3578398== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3578398== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==3578398== ==3578398== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3578398== at 0x11031A1C: __open_nocancel (open64_nocancel.c:39) ==3578398== by 0x10FB5BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3578398== by 0xF380822: ??? ==3578398== by 0xF38096F: ??? ==3578398== by 0x14D1C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3578398== by 0x14D1C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3578398== by 0x14CD2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3578398== by 0x14C772DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3578398== by 0x1084E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3578398== by 0x107E7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3578398== by 0xF4DED38: PetscInitialize (pinit.c:924) ==3578398== by 0xF3452DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3578398== by 0xF34532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3578398== by 0x261089: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3578398== by 0x25978B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3578398== by 0x25E30E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3578398== by 0x25E1AF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3578398== by 0x25E845: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3578398== by 0x255DF5: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==3578398== ==3578398== Open file descriptor 115: ==3578398== ==3578398== ==3578398== Open file descriptor 112: ==3578398== ==3578398== ==3578398== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==3578398== ==3578398== ==3578398== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3578398== ==3578398== ==3578398== ==3578398== HEAP SUMMARY: ==3578398== in use at exit: 835,564 bytes in 11,673 blocks ==3578398== total heap usage: 3,827,194 allocs, 3,815,521 frees, 1,711,614,061 bytes allocated ==3578398== ==3578398== LEAK SUMMARY: ==3578398== definitely lost: 0 bytes in 0 blocks ==3578398== indirectly lost: 0 bytes in 0 blocks ==3578398== possibly lost: 0 bytes in 0 blocks ==3578398== still reachable: 56 bytes in 3 blocks ==3578398== suppressed: 835,508 bytes in 11,670 blocks ==3578398== Reachable blocks (those to which a pointer was found) are not shown. ==3578398== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3578398== ==3578398== For lists of detected and suppressed errors, rerun with: -s ==3578398== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)