==3579872== Memcheck, a memory error detector ==3579872== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3579872== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3579872== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeWithJacobian -malloc_debug -malloc_dump -memory_info ==3579872== Parent PID: 3562972 ==3579872== ==3579872== ==3579872== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3579872== Open file descriptor 12: ==3579872== at 0x9C7307D: pipe (pipe.c:29) ==3579872== by 0x1432F07D: ??? ==3579872== by 0xEE344CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3579872== by 0x98A6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3579872== by 0x983FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3579872== by 0x8508D38: PetscInitialize (pinit.c:924) ==3579872== by 0x83DF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3579872== by 0x83DF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3579872== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3579872== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3579872== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3579872== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3579872== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3579872== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==3579872== ==3579872== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3579872== at 0x9C77A1C: __open_nocancel (open64_nocancel.c:39) ==3579872== by 0x9BFBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3579872== by 0x9798822: ??? ==3579872== by 0x979896F: ??? ==3579872== by 0xEEDB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3579872== by 0xEEDB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3579872== by 0xEE91922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3579872== by 0xEE342DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3579872== by 0x98A6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3579872== by 0x983FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3579872== by 0x8508D38: PetscInitialize (pinit.c:924) ==3579872== by 0x83DF2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3579872== by 0x83DF32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3579872== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3579872== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3579872== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3579872== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3579872== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3579872== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==3579872== ==3579872== Open file descriptor 115: ==3579872== ==3579872== ==3579872== Open file descriptor 112: ==3579872== ==3579872== ==3579872== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeWithJacobian_valgrind.txt ==3579872== ==3579872== ==3579872== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3579872== ==3579872== ==3579872== ==3579872== HEAP SUMMARY: ==3579872== in use at exit: 835,548 bytes in 11,672 blocks ==3579872== total heap usage: 82,427 allocs, 70,755 frees, 1,544,384,203 bytes allocated ==3579872== ==3579872== LEAK SUMMARY: ==3579872== definitely lost: 0 bytes in 0 blocks ==3579872== indirectly lost: 0 bytes in 0 blocks ==3579872== possibly lost: 0 bytes in 0 blocks ==3579872== still reachable: 24 bytes in 2 blocks ==3579872== suppressed: 835,524 bytes in 11,670 blocks ==3579872== Reachable blocks (those to which a pointer was found) are not shown. ==3579872== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3579872== ==3579872== For lists of detected and suppressed errors, rerun with: -s ==3579872== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)