==3564064== Memcheck, a memory error detector ==3564064== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3564064== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3564064== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==3564064== Parent PID: 3562972 ==3564064== ==3564064== ==3564064== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3564064== Open file descriptor 12: ==3564064== at 0x735807D: pipe (pipe.c:29) ==3564064== by 0x104DD07D: ??? ==3564064== by 0xC61B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3564064== by 0x8DCE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3564064== by 0x8D67D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3564064== by 0x76A7D38: PetscInitialize (pinit.c:924) ==3564064== by 0x68FC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3564064== by 0x68FC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3564064== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3564064== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3564064== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3564064== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3564064== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3564064== by 0x11B235: main (TestHdf5Converters.cpp:18) ==3564064== ==3564064== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3564064== at 0x735CA1C: __open_nocancel (open64_nocancel.c:39) ==3564064== by 0x72E0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3564064== by 0x6937822: ??? ==3564064== by 0x693796F: ??? ==3564064== by 0xC6C06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3564064== by 0xC6C0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3564064== by 0xC676922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3564064== by 0xC61B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3564064== by 0x8DCE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3564064== by 0x8D67D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3564064== by 0x76A7D38: PetscInitialize (pinit.c:924) ==3564064== by 0x68FC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3564064== by 0x68FC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3564064== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3564064== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3564064== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3564064== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3564064== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3564064== by 0x11B235: main (TestHdf5Converters.cpp:18) ==3564064== ==3564064== Open file descriptor 115: ==3564064== ==3564064== ==3564064== Open file descriptor 112: ==3564064== ==3564064== ==3564064== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==3564064== ==3564064== ==3564064== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3564064== ==3564064== ==3564064== ==3564064== HEAP SUMMARY: ==3564064== in use at exit: 835,537 bytes in 11,676 blocks ==3564064== total heap usage: 215,037 allocs, 203,361 frees, 1,596,640,465 bytes allocated ==3564064== ==3564064== LEAK SUMMARY: ==3564064== definitely lost: 0 bytes in 0 blocks ==3564064== indirectly lost: 0 bytes in 0 blocks ==3564064== possibly lost: 0 bytes in 0 blocks ==3564064== still reachable: 24 bytes in 2 blocks ==3564064== suppressed: 835,513 bytes in 11,674 blocks ==3564064== Reachable blocks (those to which a pointer was found) are not shown. ==3564064== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3564064== ==3564064== For lists of detected and suppressed errors, rerun with: -s ==3564064== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)