==3565327== Memcheck, a memory error detector ==3565327== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3565327== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3565327== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d -malloc_debug -malloc_dump -memory_info ==3565327== Parent PID: 3562972 ==3565327== ==3565327== ==3565327== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3565327== Open file descriptor 12: ==3565327== at 0xF8F107D: pipe (pipe.c:29) ==3565327== by 0x196B307D: ??? ==3565327== by 0x14CC44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3565327== by 0x11592418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3565327== by 0x1152BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3565327== by 0x10222D38: PetscInitialize (pinit.c:924) ==3565327== by 0xF1022DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3565327== by 0xF10232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3565327== by 0x13385A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3565327== by 0x12E813: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3565327== by 0x130FCC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3565327== by 0x130EC7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3565327== by 0x1314DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3565327== by 0x12D015: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==3565327== ==3565327== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3565327== at 0xF8F5A1C: __open_nocancel (open64_nocancel.c:39) ==3565327== by 0xF879BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3565327== by 0xF13D822: ??? ==3565327== by 0xF13D96F: ??? ==3565327== by 0x14D696DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3565327== by 0x14D69938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3565327== by 0x14D1F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3565327== by 0x14CC42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3565327== by 0x11592418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3565327== by 0x1152BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3565327== by 0x10222D38: PetscInitialize (pinit.c:924) ==3565327== by 0xF1022DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3565327== by 0xF10232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3565327== by 0x13385A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3565327== by 0x12E813: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3565327== by 0x130FCC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3565327== by 0x130EC7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3565327== by 0x1314DB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3565327== by 0x12D015: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==3565327== ==3565327== Open file descriptor 115: ==3565327== ==3565327== ==3565327== Open file descriptor 112: ==3565327== ==3565327== ==3565327== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d_valgrind.txt ==3565327== ==3565327== ==3565327== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3565327== ==3565327== ==3565327== ==3565327== HEAP SUMMARY: ==3565327== in use at exit: 835,564 bytes in 11,673 blocks ==3565327== total heap usage: 7,130,175 allocs, 7,118,502 frees, 9,199,175,916 bytes allocated ==3565327== ==3565327== LEAK SUMMARY: ==3565327== definitely lost: 0 bytes in 0 blocks ==3565327== indirectly lost: 0 bytes in 0 blocks ==3565327== possibly lost: 0 bytes in 0 blocks ==3565327== still reachable: 56 bytes in 3 blocks ==3565327== suppressed: 835,508 bytes in 11,670 blocks ==3565327== Reachable blocks (those to which a pointer was found) are not shown. ==3565327== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3565327== ==3565327== For lists of detected and suppressed errors, rerun with: -s ==3565327== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)