==3565387== Memcheck, a memory error detector ==3565387== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3565387== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3565387== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==3565387== Parent PID: 3562972 ==3565387== ==3565387== ==3565387== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3565387== Open file descriptor 12: ==3565387== at 0xFCD207D: pipe (pipe.c:29) ==3565387== by 0x196B307D: ??? ==3565387== by 0x14CC94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3565387== by 0x11592418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3565387== by 0x1152BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3565387== by 0x10222D38: PetscInitialize (pinit.c:924) ==3565387== by 0xF49F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3565387== by 0xF49F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3565387== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3565387== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3565387== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3565387== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3565387== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3565387== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==3565387== ==3565387== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3565387== at 0xFCD6A1C: __open_nocancel (open64_nocancel.c:39) ==3565387== by 0xFC5ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3565387== by 0xF4DA822: ??? ==3565387== by 0xF4DA96F: ??? ==3565387== by 0x14D6E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3565387== by 0x14D6E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3565387== by 0x14D24922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3565387== by 0x14CC92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3565387== by 0x11592418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3565387== by 0x1152BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3565387== by 0x10222D38: PetscInitialize (pinit.c:924) ==3565387== by 0xF49F2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3565387== by 0xF49F32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3565387== by 0x226536: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3565387== by 0x21FB71: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3565387== by 0x2236DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3565387== by 0x22357C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3565387== by 0x223C13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3565387== by 0x21DF55: main (TestOffLatticeSimulationWithPdes.cpp:19) ==3565387== ==3565387== Open file descriptor 115: ==3565387== ==3565387== ==3565387== Open file descriptor 112: ==3565387== ==3565387== ==3565387== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==3565387== ==3565387== ==3565387== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3565387== ==3565387== ==3565387== ==3565387== HEAP SUMMARY: ==3565387== in use at exit: 835,564 bytes in 11,673 blocks ==3565387== total heap usage: 8,512,469 allocs, 8,500,796 frees, 2,861,669,337 bytes allocated ==3565387== ==3565387== LEAK SUMMARY: ==3565387== definitely lost: 0 bytes in 0 blocks ==3565387== indirectly lost: 0 bytes in 0 blocks ==3565387== possibly lost: 0 bytes in 0 blocks ==3565387== still reachable: 56 bytes in 3 blocks ==3565387== suppressed: 835,508 bytes in 11,670 blocks ==3565387== Reachable blocks (those to which a pointer was found) are not shown. ==3565387== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3565387== ==3565387== For lists of detected and suppressed errors, rerun with: -s ==3565387== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)