==3565079== Memcheck, a memory error detector ==3565079== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3565079== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3565079== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==3565079== Parent PID: 3562972 ==3565079== ==3565079== ==3565079== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3565079== Open file descriptor 12: ==3565079== at 0xF93507D: pipe (pipe.c:29) ==3565079== by 0x196B307D: ??? ==3565079== by 0x14CC44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3565079== by 0x11592418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3565079== by 0x1152BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3565079== by 0x10222D38: PetscInitialize (pinit.c:924) ==3565079== by 0xF1022DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3565079== by 0xF10232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3565079== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3565079== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3565079== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3565079== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3565079== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3565079== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==3565079== ==3565079== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3565079== at 0xF939A1C: __open_nocancel (open64_nocancel.c:39) ==3565079== by 0xF8BDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3565079== by 0xF13D822: ??? ==3565079== by 0xF13D96F: ??? ==3565079== by 0x14D696DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3565079== by 0x14D69938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3565079== by 0x14D1F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3565079== by 0x14CC42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3565079== by 0x11592418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3565079== by 0x1152BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3565079== by 0x10222D38: PetscInitialize (pinit.c:924) ==3565079== by 0xF1022DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3565079== by 0xF10232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3565079== by 0x311532: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3565079== by 0x307AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3565079== by 0x30BEE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3565079== by 0x30BD80: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3565079== by 0x30C417: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3565079== by 0x305EF5: main (TestOffLatticeSimulation.cpp:19) ==3565079== ==3565079== Open file descriptor 115: ==3565079== ==3565079== ==3565079== Open file descriptor 112: ==3565079== ==3565079== ==3565079== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==3565079== ==3565079== ==3565079== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3565079== ==3565079== ==3565079== ==3565079== HEAP SUMMARY: ==3565079== in use at exit: 835,564 bytes in 11,673 blocks ==3565079== total heap usage: 12,892,691 allocs, 12,881,018 frees, 4,063,768,741 bytes allocated ==3565079== ==3565079== LEAK SUMMARY: ==3565079== definitely lost: 0 bytes in 0 blocks ==3565079== indirectly lost: 0 bytes in 0 blocks ==3565079== possibly lost: 0 bytes in 0 blocks ==3565079== still reachable: 56 bytes in 3 blocks ==3565079== suppressed: 835,508 bytes in 11,670 blocks ==3565079== Reachable blocks (those to which a pointer was found) are not shown. ==3565079== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3565079== ==3565079== For lists of detected and suppressed errors, rerun with: -s ==3565079== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)