==3564855== Memcheck, a memory error detector ==3564855== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3564855== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3564855== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==3564855== Parent PID: 3562972 ==3564855== ==3564855== ==3564855== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3564855== Open file descriptor 12: ==3564855== at 0xF0A007D: pipe (pipe.c:29) ==3564855== by 0x196B307D: ??? ==3564855== by 0x13C124CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3564855== by 0xE9A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3564855== by 0xE941D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3564855== by 0xD638D38: PetscInitialize (pinit.c:924) ==3564855== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3564855== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3564855== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3564855== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3564855== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3564855== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3564855== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3564855== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==3564855== ==3564855== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3564855== at 0xF0A4A1C: __open_nocancel (open64_nocancel.c:39) ==3564855== by 0xF028BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3564855== by 0xD4D8822: ??? ==3564855== by 0xD4D896F: ??? ==3564855== by 0x13CB76DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3564855== by 0x13CB7938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3564855== by 0x13C6D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3564855== by 0x13C122DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3564855== by 0xE9A8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3564855== by 0xE941D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3564855== by 0xD638D38: PetscInitialize (pinit.c:924) ==3564855== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3564855== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3564855== by 0x133C55: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3564855== by 0x12C93D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3564855== by 0x12F6BE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3564855== by 0x12F55E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3564855== by 0x12FBF5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3564855== by 0x12AD65: main (TestPottsUpdateRules.cpp:19) ==3564855== ==3564855== Open file descriptor 115: ==3564855== ==3564855== ==3564855== Open file descriptor 112: ==3564855== ==3564855== ==3564855== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==3564855== ==3564855== ==3564855== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3564855== ==3564855== ==3564855== ==3564855== HEAP SUMMARY: ==3564855== in use at exit: 835,633 bytes in 11,677 blocks ==3564855== total heap usage: 75,916 allocs, 64,239 frees, 1,541,722,230 bytes allocated ==3564855== ==3564855== LEAK SUMMARY: ==3564855== definitely lost: 0 bytes in 0 blocks ==3564855== indirectly lost: 0 bytes in 0 blocks ==3564855== possibly lost: 0 bytes in 0 blocks ==3564855== still reachable: 56 bytes in 3 blocks ==3564855== suppressed: 835,577 bytes in 11,674 blocks ==3564855== Reachable blocks (those to which a pointer was found) are not shown. ==3564855== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3564855== ==3564855== For lists of detected and suppressed errors, rerun with: -s ==3564855== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)