==3578503== Memcheck, a memory error detector ==3578503== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3578503== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3578503== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningContactInhibitionSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==3578503== Parent PID: 3562972 ==3578503== ==3578503== ==3578503== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3578503== Open file descriptor 12: ==3578503== at 0x10DA807D: pipe (pipe.c:29) ==3578503== by 0x196B307D: ??? ==3578503== by 0x14C244CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3578503== by 0x105C9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3578503== by 0x10562D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3578503== by 0xF22BD38: PetscInitialize (pinit.c:924) ==3578503== by 0xF1022DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3578503== by 0xF10232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3578503== by 0x128209: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3578503== by 0x123673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3578503== by 0x1259CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3578503== by 0x1258CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3578503== by 0x125EDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3578503== by 0x121E75: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==3578503== ==3578503== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3578503== at 0x10DACA1C: __open_nocancel (open64_nocancel.c:39) ==3578503== by 0x10D30BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3578503== by 0x104BB822: ??? ==3578503== by 0x104BB96F: ??? ==3578503== by 0x14CC96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3578503== by 0x14CC9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3578503== by 0x14C7F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3578503== by 0x14C242DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3578503== by 0x105C9418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3578503== by 0x10562D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3578503== by 0xF22BD38: PetscInitialize (pinit.c:924) ==3578503== by 0xF1022DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3578503== by 0xF10232D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3578503== by 0x128209: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3578503== by 0x123673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3578503== by 0x1259CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3578503== by 0x1258CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3578503== by 0x125EDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3578503== by 0x121E75: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==3578503== ==3578503== Open file descriptor 115: ==3578503== ==3578503== ==3578503== Open file descriptor 112: ==3578503== ==3578503== ==3578503== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningContactInhibitionSimulationsTutorial_valgrind.txt ==3578503== ==3578503== ==3578503== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3578503== ==3578503== ==3578503== ==3578503== HEAP SUMMARY: ==3578503== in use at exit: 835,564 bytes in 11,673 blocks ==3578503== total heap usage: 11,275,574 allocs, 11,263,901 frees, 4,973,085,373 bytes allocated ==3578503== ==3578503== LEAK SUMMARY: ==3578503== definitely lost: 0 bytes in 0 blocks ==3578503== indirectly lost: 0 bytes in 0 blocks ==3578503== possibly lost: 0 bytes in 0 blocks ==3578503== still reachable: 56 bytes in 3 blocks ==3578503== suppressed: 835,508 bytes in 11,670 blocks ==3578503== Reachable blocks (those to which a pointer was found) are not shown. ==3578503== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3578503== ==3578503== For lists of detected and suppressed errors, rerun with: -s ==3578503== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)