==3578662== Memcheck, a memory error detector ==3578662== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3578662== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3578662== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==3578662== Parent PID: 3562972 ==3578662== ==3578662== ==3578662== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3578662== Open file descriptor 12: ==3578662== at 0xDBA707D: pipe (pipe.c:29) ==3578662== by 0x196B307D: ??? ==3578662== by 0x14CC64CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3578662== by 0x114AB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3578662== by 0x11444D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3578662== by 0x1013BD38: PetscInitialize (pinit.c:924) ==3578662== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3578662== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3578662== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3578662== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3578662== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3578662== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3578662== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3578662== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==3578662== ==3578662== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3578662== at 0xDBABA1C: __open_nocancel (open64_nocancel.c:39) ==3578662== by 0xDB2FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3578662== by 0xD4D8822: ??? ==3578662== by 0xD4D896F: ??? ==3578662== by 0x14D6B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3578662== by 0x14D6B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3578662== by 0x14D21922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3578662== by 0x14CC62DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3578662== by 0x114AB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3578662== by 0x11444D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3578662== by 0x1013BD38: PetscInitialize (pinit.c:924) ==3578662== by 0xD49D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3578662== by 0xD49D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3578662== by 0x124714: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==3578662== by 0x11FC2D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3578662== by 0x12224E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3578662== by 0x1220EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3578662== by 0x122785: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3578662== by 0x11E055: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==3578662== ==3578662== Open file descriptor 115: ==3578662== ==3578662== ==3578662== Open file descriptor 112: ==3578662== ==3578662== ==3578662== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==3578662== ==3578662== ==3578662== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3578662== ==3578662== ==3578662== ==3578662== HEAP SUMMARY: ==3578662== in use at exit: 835,564 bytes in 11,673 blocks ==3578662== total heap usage: 40,695,475 allocs, 40,683,802 frees, 4,032,240,361 bytes allocated ==3578662== ==3578662== LEAK SUMMARY: ==3578662== definitely lost: 0 bytes in 0 blocks ==3578662== indirectly lost: 0 bytes in 0 blocks ==3578662== possibly lost: 0 bytes in 0 blocks ==3578662== still reachable: 56 bytes in 3 blocks ==3578662== suppressed: 835,508 bytes in 11,670 blocks ==3578662== Reachable blocks (those to which a pointer was found) are not shown. ==3578662== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3578662== ==3578662== For lists of detected and suppressed errors, rerun with: -s ==3578662== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)