==3563647== Memcheck, a memory error detector ==3563647== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==3563647== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==3563647== Command: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestVertexMesh -malloc_debug -malloc_dump -memory_info ==3563647== Parent PID: 3562972 ==3563647== ==3563647== ==3563647== FILE DESCRIPTORS: 9 open (3 std) at exit. ==3563647== Open file descriptor 12: ==3563647== at 0x824707D: pipe (pipe.c:29) ==3563647== by 0x100CE07D: ??? ==3563647== by 0xBA134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3563647== by 0x7A68418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3563647== by 0x7A01D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3563647== by 0x66F8D38: PetscInitialize (pinit.c:924) ==3563647== by 0x655D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3563647== by 0x655D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3563647== by 0x14372D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3563647== by 0x13DAFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3563647== by 0x14137A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3563647== by 0x14121A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3563647== by 0x1418B1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3563647== by 0x13BF25: main (TestVertexMesh.cpp:19) ==3563647== ==3563647== Open file descriptor 8: /dev/shm/open_mpi.0000 ==3563647== at 0x824BA1C: __open_nocancel (open64_nocancel.c:39) ==3563647== by 0x81CFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==3563647== by 0x6598822: ??? ==3563647== by 0x659896F: ??? ==3563647== by 0xBAB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3563647== by 0xBAB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3563647== by 0xBA6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==3563647== by 0xBA132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==3563647== by 0x7A68418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3563647== by 0x7A01D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==3563647== by 0x66F8D38: PetscInitialize (pinit.c:924) ==3563647== by 0x655D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==3563647== by 0x655D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==3563647== by 0x14372D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==3563647== by 0x13DAFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==3563647== by 0x14137A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==3563647== by 0x14121A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==3563647== by 0x1418B1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==3563647== by 0x13BF25: main (TestVertexMesh.cpp:19) ==3563647== ==3563647== Open file descriptor 115: ==3563647== ==3563647== ==3563647== Open file descriptor 112: ==3563647== ==3563647== ==3563647== Open file descriptor 4: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexMesh_valgrind.txt ==3563647== ==3563647== ==3563647== Open file descriptor 3: /home/gh/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==3563647== ==3563647== ==3563647== ==3563647== HEAP SUMMARY: ==3563647== in use at exit: 838,057 bytes in 11,677 blocks ==3563647== total heap usage: 102,277 allocs, 90,600 frees, 1,548,212,453 bytes allocated ==3563647== ==3563647== LEAK SUMMARY: ==3563647== definitely lost: 0 bytes in 0 blocks ==3563647== indirectly lost: 0 bytes in 0 blocks ==3563647== possibly lost: 0 bytes in 0 blocks ==3563647== still reachable: 2,576 bytes in 3 blocks ==3563647== suppressed: 835,481 bytes in 11,674 blocks ==3563647== Reachable blocks (those to which a pointer was found) are not shown. ==3563647== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==3563647== ==3563647== For lists of detected and suppressed errors, rerun with: -s ==3563647== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)